SNP-Target Genes Interaction Perturbing the Cancer Risk in the Post-GWAS

Cancer ranks as the second leading cause of death worldwide, and, being a genetic disease, it is highly heritable. Over the past few decades, genome-wide association studies (GWAS) have identified many risk-associated loci harboring hundreds of single nucleotide polymorphisms (SNPs). Some of these c...

Full description

Bibliographic Details
Main Authors: Wenmin Yang, Te Zhang, Xuming Song, Gaochao Dong, Lin Xu, Feng Jiang
Format: Article
Language:English
Published: MDPI AG 2022-11-01
Series:Cancers
Subjects:
Online Access:https://www.mdpi.com/2072-6694/14/22/5636
_version_ 1797465699496493056
author Wenmin Yang
Te Zhang
Xuming Song
Gaochao Dong
Lin Xu
Feng Jiang
author_facet Wenmin Yang
Te Zhang
Xuming Song
Gaochao Dong
Lin Xu
Feng Jiang
author_sort Wenmin Yang
collection DOAJ
description Cancer ranks as the second leading cause of death worldwide, and, being a genetic disease, it is highly heritable. Over the past few decades, genome-wide association studies (GWAS) have identified many risk-associated loci harboring hundreds of single nucleotide polymorphisms (SNPs). Some of these cancer-associated SNPs have been revealed as causal, and the functional characterization of the mechanisms underlying the cancer risk association has been illuminated in some instances. In this review, based on the different positions of SNPs and their modes of action, we discuss the mechanisms underlying how SNPs regulate the expression of target genes to consequently affect tumorigenesis and the development of cancer.
first_indexed 2024-03-09T18:26:12Z
format Article
id doaj.art-3fe60370e67045818f50b8b7d399fed2
institution Directory Open Access Journal
issn 2072-6694
language English
last_indexed 2024-03-09T18:26:12Z
publishDate 2022-11-01
publisher MDPI AG
record_format Article
series Cancers
spelling doaj.art-3fe60370e67045818f50b8b7d399fed22023-11-24T07:54:19ZengMDPI AGCancers2072-66942022-11-011422563610.3390/cancers14225636SNP-Target Genes Interaction Perturbing the Cancer Risk in the Post-GWASWenmin Yang0Te Zhang1Xuming Song2Gaochao Dong3Lin Xu4Feng Jiang5Department of Thoracic Surgery, Nanjing Medical University Affiliated Cancer Hospital and Jiangsu Cancer Hospital and Jiangsu Institute of Cancer Research, Nanjing 210009, ChinaDepartment of Thoracic Surgery, Nanjing Medical University Affiliated Cancer Hospital and Jiangsu Cancer Hospital and Jiangsu Institute of Cancer Research, Nanjing 210009, ChinaDepartment of Thoracic Surgery, Nanjing Medical University Affiliated Cancer Hospital and Jiangsu Cancer Hospital and Jiangsu Institute of Cancer Research, Nanjing 210009, ChinaDepartment of Thoracic Surgery, Nanjing Medical University Affiliated Cancer Hospital and Jiangsu Cancer Hospital and Jiangsu Institute of Cancer Research, Nanjing 210009, ChinaDepartment of Thoracic Surgery, Nanjing Medical University Affiliated Cancer Hospital and Jiangsu Cancer Hospital and Jiangsu Institute of Cancer Research, Nanjing 210009, ChinaDepartment of Thoracic Surgery, Nanjing Medical University Affiliated Cancer Hospital and Jiangsu Cancer Hospital and Jiangsu Institute of Cancer Research, Nanjing 210009, ChinaCancer ranks as the second leading cause of death worldwide, and, being a genetic disease, it is highly heritable. Over the past few decades, genome-wide association studies (GWAS) have identified many risk-associated loci harboring hundreds of single nucleotide polymorphisms (SNPs). Some of these cancer-associated SNPs have been revealed as causal, and the functional characterization of the mechanisms underlying the cancer risk association has been illuminated in some instances. In this review, based on the different positions of SNPs and their modes of action, we discuss the mechanisms underlying how SNPs regulate the expression of target genes to consequently affect tumorigenesis and the development of cancer.https://www.mdpi.com/2072-6694/14/22/5636genome-wide association analysissingle nucleotide polymorphismcancermolecular and biological mechanism
spellingShingle Wenmin Yang
Te Zhang
Xuming Song
Gaochao Dong
Lin Xu
Feng Jiang
SNP-Target Genes Interaction Perturbing the Cancer Risk in the Post-GWAS
Cancers
genome-wide association analysis
single nucleotide polymorphism
cancer
molecular and biological mechanism
title SNP-Target Genes Interaction Perturbing the Cancer Risk in the Post-GWAS
title_full SNP-Target Genes Interaction Perturbing the Cancer Risk in the Post-GWAS
title_fullStr SNP-Target Genes Interaction Perturbing the Cancer Risk in the Post-GWAS
title_full_unstemmed SNP-Target Genes Interaction Perturbing the Cancer Risk in the Post-GWAS
title_short SNP-Target Genes Interaction Perturbing the Cancer Risk in the Post-GWAS
title_sort snp target genes interaction perturbing the cancer risk in the post gwas
topic genome-wide association analysis
single nucleotide polymorphism
cancer
molecular and biological mechanism
url https://www.mdpi.com/2072-6694/14/22/5636
work_keys_str_mv AT wenminyang snptargetgenesinteractionperturbingthecancerriskinthepostgwas
AT tezhang snptargetgenesinteractionperturbingthecancerriskinthepostgwas
AT xumingsong snptargetgenesinteractionperturbingthecancerriskinthepostgwas
AT gaochaodong snptargetgenesinteractionperturbingthecancerriskinthepostgwas
AT linxu snptargetgenesinteractionperturbingthecancerriskinthepostgwas
AT fengjiang snptargetgenesinteractionperturbingthecancerriskinthepostgwas