WGS Data Collections: How Do Genomic Databases Transform Medicine?

As a scientific community we assumed that exome sequencing will elucidate the basis of most heritable diseases. However, it turned out it was not the case; therefore, attention has been increasingly focused on the non-coding sequences that encompass 98% of the genome and may play an important regula...

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Main Authors: Zbigniew J. Król, Paula Dobosz, Antonina Ślubowska, Magdalena Mroczek
Format: Article
Language:English
Published: MDPI AG 2023-02-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:https://www.mdpi.com/1422-0067/24/3/3031
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author Zbigniew J. Król
Paula Dobosz
Antonina Ślubowska
Magdalena Mroczek
author_facet Zbigniew J. Król
Paula Dobosz
Antonina Ślubowska
Magdalena Mroczek
author_sort Zbigniew J. Król
collection DOAJ
description As a scientific community we assumed that exome sequencing will elucidate the basis of most heritable diseases. However, it turned out it was not the case; therefore, attention has been increasingly focused on the non-coding sequences that encompass 98% of the genome and may play an important regulatory function. The first WGS-based datasets have already been released including underrepresented populations. Although many databases contain pooled data from several cohorts, recently the importance of local databases has been highlighted. Genomic databases are not only collecting data but may also contribute to better diagnostics and therapies. They may find applications in population studies, rare diseases, oncology, pharmacogenetics, and infectious and inflammatory diseases. Further data may be analysed with Al technologies and in the context of other omics data. To exemplify their utility, we put a highlight on the Polish genome database and its practical application.
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spelling doaj.art-40975c1027cc4e949d4bb292029882f42023-11-16T17:06:00ZengMDPI AGInternational Journal of Molecular Sciences1661-65961422-00672023-02-01243303110.3390/ijms24033031WGS Data Collections: How Do Genomic Databases Transform Medicine?Zbigniew J. Król0Paula Dobosz1Antonina Ślubowska2Magdalena Mroczek3Central Clinical Hospital of Ministry of the Interior and Administration in Warsaw, 02-507 Warsaw, PolandCentral Clinical Hospital of Ministry of the Interior and Administration in Warsaw, 02-507 Warsaw, PolandDepartment of Biostatistics and Research Methodology, Faculty of Medicine, Collegium Medicum, Cardinal Stefan Wyszyński University in Warsaw, Wóycickiego 1/3, 01-938 Warsaw, PolandCenter for Cardiovascular Genetics and Gene Diagnostics, Foundation for People with Rare Diseases, Wagistrasse 25, 8952 CH-Schlieren-Zurich, SwitzerlandAs a scientific community we assumed that exome sequencing will elucidate the basis of most heritable diseases. However, it turned out it was not the case; therefore, attention has been increasingly focused on the non-coding sequences that encompass 98% of the genome and may play an important regulatory function. The first WGS-based datasets have already been released including underrepresented populations. Although many databases contain pooled data from several cohorts, recently the importance of local databases has been highlighted. Genomic databases are not only collecting data but may also contribute to better diagnostics and therapies. They may find applications in population studies, rare diseases, oncology, pharmacogenetics, and infectious and inflammatory diseases. Further data may be analysed with Al technologies and in the context of other omics data. To exemplify their utility, we put a highlight on the Polish genome database and its practical application.https://www.mdpi.com/1422-0067/24/3/3031COVID-19databasegenomic databaseswhole-genome sequencingWGS
spellingShingle Zbigniew J. Król
Paula Dobosz
Antonina Ślubowska
Magdalena Mroczek
WGS Data Collections: How Do Genomic Databases Transform Medicine?
International Journal of Molecular Sciences
COVID-19
database
genomic databases
whole-genome sequencing
WGS
title WGS Data Collections: How Do Genomic Databases Transform Medicine?
title_full WGS Data Collections: How Do Genomic Databases Transform Medicine?
title_fullStr WGS Data Collections: How Do Genomic Databases Transform Medicine?
title_full_unstemmed WGS Data Collections: How Do Genomic Databases Transform Medicine?
title_short WGS Data Collections: How Do Genomic Databases Transform Medicine?
title_sort wgs data collections how do genomic databases transform medicine
topic COVID-19
database
genomic databases
whole-genome sequencing
WGS
url https://www.mdpi.com/1422-0067/24/3/3031
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