Solving Large Nonlinear Systems of First-Order Ordinary Differential Equations With Hierarchical Structure Using Multi-GPGPUs and an Adaptive Runge Kutta ODE Solver

Solving Large Nonlinear Systems of First-Order Ordinary Differential Equations With Hierarchical Structure Using Multi-GPGPUs and an Adaptive Runge Kutta ODE Solver

The adaptive Runge-Kutta (ARK) method on multi-general-purpose graphical processing units (GPUs) is used for solving large nonlinear systems of first-order ordinary differential equations (ODEs) with over ~ 10 000 variables describing a large genetic network in systems biology for the biological clo...

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Bibliographic Details
Main Authors: Ahmad Al-Omari, Jonathan Arnold, Thiab Taha, Heinz-Bernd Schuttler
Format: Article
Language:English
Published: IEEE 2013-01-01
Series:IEEE Access
Subjects:
Bioinformatics
biological clock
general-purpose graphical processing unit
finite element method
ordinary differential equation
adaptive Runge–Kutta integration
Online Access:https://ieeexplore.ieee.org/document/6662399/

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