The Diversity of Nutritional Metabolites: Origin, Dissection, and Application in Crop Breeding

The chemical diversity of plants is very high, and plant-based foods provide almost all the nutrients necessary for human health, either directly or indirectly. With advancements in plant metabolomics studies, the concept of nutritional metabolites has been expanded and updated. Because the concentr...

Full description

Bibliographic Details
Main Authors: Chuanying Fang, Jie Luo, Shouchuang Wang
Format: Article
Language:English
Published: Frontiers Media S.A. 2019-08-01
Series:Frontiers in Plant Science
Subjects:
Online Access:https://www.frontiersin.org/article/10.3389/fpls.2019.01028/full
_version_ 1828346840808947712
author Chuanying Fang
Jie Luo
Jie Luo
Shouchuang Wang
author_facet Chuanying Fang
Jie Luo
Jie Luo
Shouchuang Wang
author_sort Chuanying Fang
collection DOAJ
description The chemical diversity of plants is very high, and plant-based foods provide almost all the nutrients necessary for human health, either directly or indirectly. With advancements in plant metabolomics studies, the concept of nutritional metabolites has been expanded and updated. Because the concentration of many nutrients is usually low in plant-based foods, especially those from crops, metabolome-assisted breeding techniques using molecular markers associated with the synthesis of nutritional metabolites have been developed and used to improve nutritional quality of crops. Here, we review the origins of the diversity of nutrient metabolites from a genomic perspective and the role of gene duplication and divergence. In addition, we systematically review recent advances in the metabolomic and genetic basis of metabolite production in major crops. With the development of genome sequencing and metabolic detection technologies, multi-omic integrative analysis of genomes, transcriptomes, and metabolomes has greatly facilitated the deciphering of the genetic basis of metabolic pathways and the diversity of nutrient metabolites. Finally, we summarize the application of nutrient diversity in crop breeding and discuss the future development of a viable alternative to metabolome-assisted breeding techniques that can be used to improve crop nutrient quality.
first_indexed 2024-04-14T00:31:52Z
format Article
id doaj.art-41c82086b374442495d098191892164c
institution Directory Open Access Journal
issn 1664-462X
language English
last_indexed 2024-04-14T00:31:52Z
publishDate 2019-08-01
publisher Frontiers Media S.A.
record_format Article
series Frontiers in Plant Science
spelling doaj.art-41c82086b374442495d098191892164c2022-12-22T02:22:31ZengFrontiers Media S.A.Frontiers in Plant Science1664-462X2019-08-011010.3389/fpls.2019.01028471352The Diversity of Nutritional Metabolites: Origin, Dissection, and Application in Crop BreedingChuanying Fang0Jie Luo1Jie Luo2Shouchuang Wang3Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresource, College of Tropical Crops, Hainan University, Haikou, ChinaHainan Key Laboratory for Sustainable Utilization of Tropical Bioresource, College of Tropical Crops, Hainan University, Haikou, ChinaNational Key Laboratory of Crop Genetic Improvement and National Center of Plant Gene Research (Wuhan), Huazhong Agricultural University, Wuhan, ChinaHainan Key Laboratory for Sustainable Utilization of Tropical Bioresource, College of Tropical Crops, Hainan University, Haikou, ChinaThe chemical diversity of plants is very high, and plant-based foods provide almost all the nutrients necessary for human health, either directly or indirectly. With advancements in plant metabolomics studies, the concept of nutritional metabolites has been expanded and updated. Because the concentration of many nutrients is usually low in plant-based foods, especially those from crops, metabolome-assisted breeding techniques using molecular markers associated with the synthesis of nutritional metabolites have been developed and used to improve nutritional quality of crops. Here, we review the origins of the diversity of nutrient metabolites from a genomic perspective and the role of gene duplication and divergence. In addition, we systematically review recent advances in the metabolomic and genetic basis of metabolite production in major crops. With the development of genome sequencing and metabolic detection technologies, multi-omic integrative analysis of genomes, transcriptomes, and metabolomes has greatly facilitated the deciphering of the genetic basis of metabolic pathways and the diversity of nutrient metabolites. Finally, we summarize the application of nutrient diversity in crop breeding and discuss the future development of a viable alternative to metabolome-assisted breeding techniques that can be used to improve crop nutrient quality.https://www.frontiersin.org/article/10.3389/fpls.2019.01028/fullnutritional metabolitesmetabolic diversitycropsgenetic basesbreeding
spellingShingle Chuanying Fang
Jie Luo
Jie Luo
Shouchuang Wang
The Diversity of Nutritional Metabolites: Origin, Dissection, and Application in Crop Breeding
Frontiers in Plant Science
nutritional metabolites
metabolic diversity
crops
genetic bases
breeding
title The Diversity of Nutritional Metabolites: Origin, Dissection, and Application in Crop Breeding
title_full The Diversity of Nutritional Metabolites: Origin, Dissection, and Application in Crop Breeding
title_fullStr The Diversity of Nutritional Metabolites: Origin, Dissection, and Application in Crop Breeding
title_full_unstemmed The Diversity of Nutritional Metabolites: Origin, Dissection, and Application in Crop Breeding
title_short The Diversity of Nutritional Metabolites: Origin, Dissection, and Application in Crop Breeding
title_sort diversity of nutritional metabolites origin dissection and application in crop breeding
topic nutritional metabolites
metabolic diversity
crops
genetic bases
breeding
url https://www.frontiersin.org/article/10.3389/fpls.2019.01028/full
work_keys_str_mv AT chuanyingfang thediversityofnutritionalmetabolitesorigindissectionandapplicationincropbreeding
AT jieluo thediversityofnutritionalmetabolitesorigindissectionandapplicationincropbreeding
AT jieluo thediversityofnutritionalmetabolitesorigindissectionandapplicationincropbreeding
AT shouchuangwang thediversityofnutritionalmetabolitesorigindissectionandapplicationincropbreeding
AT chuanyingfang diversityofnutritionalmetabolitesorigindissectionandapplicationincropbreeding
AT jieluo diversityofnutritionalmetabolitesorigindissectionandapplicationincropbreeding
AT jieluo diversityofnutritionalmetabolitesorigindissectionandapplicationincropbreeding
AT shouchuangwang diversityofnutritionalmetabolitesorigindissectionandapplicationincropbreeding