Multiomics analysis of naturally efficacious lipid nanoparticle coronas reveals high-density lipoprotein is necessary for their function

Abstract In terms of lipid nanoparticle (LNP) engineering, the relationship between particle composition, delivery efficacy, and the composition of the biocoronas that form around LNPs, is poorly understood. To explore this we analyze naturally efficacious biocorona compositions using an unbiased sc...

Full description

Bibliographic Details
Main Authors: Kai Liu, Ralf Nilsson, Elisa Lázaro-Ibáñez, Hanna Duàn, Tasso Miliotis, Marie Strimfors, Michael Lerche, Ana Rita Salgado Ribeiro, Johan Ulander, Daniel Lindén, Anna Salvati, Alan Sabirsh
Format: Article
Language:English
Published: Nature Portfolio 2023-07-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-023-39768-9
_version_ 1797784551049658368
author Kai Liu
Ralf Nilsson
Elisa Lázaro-Ibáñez
Hanna Duàn
Tasso Miliotis
Marie Strimfors
Michael Lerche
Ana Rita Salgado Ribeiro
Johan Ulander
Daniel Lindén
Anna Salvati
Alan Sabirsh
author_facet Kai Liu
Ralf Nilsson
Elisa Lázaro-Ibáñez
Hanna Duàn
Tasso Miliotis
Marie Strimfors
Michael Lerche
Ana Rita Salgado Ribeiro
Johan Ulander
Daniel Lindén
Anna Salvati
Alan Sabirsh
author_sort Kai Liu
collection DOAJ
description Abstract In terms of lipid nanoparticle (LNP) engineering, the relationship between particle composition, delivery efficacy, and the composition of the biocoronas that form around LNPs, is poorly understood. To explore this we analyze naturally efficacious biocorona compositions using an unbiased screening workflow. First, LNPs are complexed with plasma samples, from individual lean or obese male rats, and then functionally evaluated in vitro. Then, a fast, automated, and miniaturized method retrieves the LNPs with intact biocoronas, and multiomics analysis of the LNP-corona complexes reveals the particle corona content arising from each individual plasma sample. We find that the most efficacious LNP-corona complexes were enriched with high-density lipoprotein (HDL) and, compared to the commonly used corona-biomarker Apolipoprotein E, corona HDL content was a superior predictor of in-vivo activity. Using technically challenging and clinically relevant lipid nanoparticles, these methods reveal a previously unreported role for HDL as a source of ApoE and, form a framework for improving LNP therapeutic efficacy by controlling corona composition.
first_indexed 2024-03-13T00:41:30Z
format Article
id doaj.art-41ddf1ba8b124addb8c13982c9688b78
institution Directory Open Access Journal
issn 2041-1723
language English
last_indexed 2024-03-13T00:41:30Z
publishDate 2023-07-01
publisher Nature Portfolio
record_format Article
series Nature Communications
spelling doaj.art-41ddf1ba8b124addb8c13982c9688b782023-07-09T11:18:13ZengNature PortfolioNature Communications2041-17232023-07-0114111610.1038/s41467-023-39768-9Multiomics analysis of naturally efficacious lipid nanoparticle coronas reveals high-density lipoprotein is necessary for their functionKai Liu0Ralf Nilsson1Elisa Lázaro-Ibáñez2Hanna Duàn3Tasso Miliotis4Marie Strimfors5Michael Lerche6Ana Rita Salgado Ribeiro7Johan Ulander8Daniel Lindén9Anna Salvati10Alan Sabirsh11Advanced Drug Delivery, Pharmaceutical Sciences, R&D, AstraZenecaTranslational Science and Experimental Medicine, Research and Early Development, Cardiovascular, Renal and Metabolism, BioPharmaceuticals R&D, AstraZenecaAdvanced Drug Delivery, Pharmaceutical Sciences, R&D, AstraZenecaAdvanced Drug Delivery, Pharmaceutical Sciences, R&D, AstraZenecaTranslational Science and Experimental Medicine, Research and Early Development, Cardiovascular, Renal and Metabolism, BioPharmaceuticals R&D, AstraZenecaBioscience Metabolism, Research and Early Development, Cardiovascular, Renal and Metabolism, BioPharmaceuticals R&D, AstraZenecaAdvanced Drug Delivery, Pharmaceutical Sciences, R&D, AstraZenecaAdvanced Drug Delivery, Pharmaceutical Sciences, R&D, AstraZenecaData Science and Modelling, Pharmaceutical Sciences, R&D, AstraZenecaBioscience Metabolism, Research and Early Development, Cardiovascular, Renal and Metabolism, BioPharmaceuticals R&D, AstraZenecaDepartment of Nanomedicine & Drug Targeting, Groningen Research Institute of Pharmacy, University of GroningenAdvanced Drug Delivery, Pharmaceutical Sciences, R&D, AstraZenecaAbstract In terms of lipid nanoparticle (LNP) engineering, the relationship between particle composition, delivery efficacy, and the composition of the biocoronas that form around LNPs, is poorly understood. To explore this we analyze naturally efficacious biocorona compositions using an unbiased screening workflow. First, LNPs are complexed with plasma samples, from individual lean or obese male rats, and then functionally evaluated in vitro. Then, a fast, automated, and miniaturized method retrieves the LNPs with intact biocoronas, and multiomics analysis of the LNP-corona complexes reveals the particle corona content arising from each individual plasma sample. We find that the most efficacious LNP-corona complexes were enriched with high-density lipoprotein (HDL) and, compared to the commonly used corona-biomarker Apolipoprotein E, corona HDL content was a superior predictor of in-vivo activity. Using technically challenging and clinically relevant lipid nanoparticles, these methods reveal a previously unreported role for HDL as a source of ApoE and, form a framework for improving LNP therapeutic efficacy by controlling corona composition.https://doi.org/10.1038/s41467-023-39768-9
spellingShingle Kai Liu
Ralf Nilsson
Elisa Lázaro-Ibáñez
Hanna Duàn
Tasso Miliotis
Marie Strimfors
Michael Lerche
Ana Rita Salgado Ribeiro
Johan Ulander
Daniel Lindén
Anna Salvati
Alan Sabirsh
Multiomics analysis of naturally efficacious lipid nanoparticle coronas reveals high-density lipoprotein is necessary for their function
Nature Communications
title Multiomics analysis of naturally efficacious lipid nanoparticle coronas reveals high-density lipoprotein is necessary for their function
title_full Multiomics analysis of naturally efficacious lipid nanoparticle coronas reveals high-density lipoprotein is necessary for their function
title_fullStr Multiomics analysis of naturally efficacious lipid nanoparticle coronas reveals high-density lipoprotein is necessary for their function
title_full_unstemmed Multiomics analysis of naturally efficacious lipid nanoparticle coronas reveals high-density lipoprotein is necessary for their function
title_short Multiomics analysis of naturally efficacious lipid nanoparticle coronas reveals high-density lipoprotein is necessary for their function
title_sort multiomics analysis of naturally efficacious lipid nanoparticle coronas reveals high density lipoprotein is necessary for their function
url https://doi.org/10.1038/s41467-023-39768-9
work_keys_str_mv AT kailiu multiomicsanalysisofnaturallyefficaciouslipidnanoparticlecoronasrevealshighdensitylipoproteinisnecessaryfortheirfunction
AT ralfnilsson multiomicsanalysisofnaturallyefficaciouslipidnanoparticlecoronasrevealshighdensitylipoproteinisnecessaryfortheirfunction
AT elisalazaroibanez multiomicsanalysisofnaturallyefficaciouslipidnanoparticlecoronasrevealshighdensitylipoproteinisnecessaryfortheirfunction
AT hannaduan multiomicsanalysisofnaturallyefficaciouslipidnanoparticlecoronasrevealshighdensitylipoproteinisnecessaryfortheirfunction
AT tassomiliotis multiomicsanalysisofnaturallyefficaciouslipidnanoparticlecoronasrevealshighdensitylipoproteinisnecessaryfortheirfunction
AT mariestrimfors multiomicsanalysisofnaturallyefficaciouslipidnanoparticlecoronasrevealshighdensitylipoproteinisnecessaryfortheirfunction
AT michaellerche multiomicsanalysisofnaturallyefficaciouslipidnanoparticlecoronasrevealshighdensitylipoproteinisnecessaryfortheirfunction
AT anaritasalgadoribeiro multiomicsanalysisofnaturallyefficaciouslipidnanoparticlecoronasrevealshighdensitylipoproteinisnecessaryfortheirfunction
AT johanulander multiomicsanalysisofnaturallyefficaciouslipidnanoparticlecoronasrevealshighdensitylipoproteinisnecessaryfortheirfunction
AT daniellinden multiomicsanalysisofnaturallyefficaciouslipidnanoparticlecoronasrevealshighdensitylipoproteinisnecessaryfortheirfunction
AT annasalvati multiomicsanalysisofnaturallyefficaciouslipidnanoparticlecoronasrevealshighdensitylipoproteinisnecessaryfortheirfunction
AT alansabirsh multiomicsanalysisofnaturallyefficaciouslipidnanoparticlecoronasrevealshighdensitylipoproteinisnecessaryfortheirfunction