Crystal structure, conformation and vibrational characteristics of diethyl 4,4′-disulfanediylbis(6-methyl-2-phenylpyrimidine-5-carboxylate) – A new pharmaceutical cure

The crystal and molecular structures of diethyl 4,4′-disulfanediylbis(6-methyl-2-phenylpyrimidine-5-carboxylate) have been determined by X-ray diffraction and quantum chemical DFT analysis. The title compound crystallizes in orthorhombic Pbca (D2h15) space group, with one molecule in the asymmetric...

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Main Authors: Wojciech Sąsiadek, Iwona Bryndal, Jadwiga Lorenc, Maciej Ptak, Jerzy Cieplik, Marcin Stolarczyk, Tadeusz Lis, Jerzy Hanuza
Format: Article
Language:English
Published: Elsevier 2019-09-01
Series:Arabian Journal of Chemistry
Online Access:http://www.sciencedirect.com/science/article/pii/S1878535216300181
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author Wojciech Sąsiadek
Iwona Bryndal
Jadwiga Lorenc
Maciej Ptak
Jerzy Cieplik
Marcin Stolarczyk
Tadeusz Lis
Jerzy Hanuza
author_facet Wojciech Sąsiadek
Iwona Bryndal
Jadwiga Lorenc
Maciej Ptak
Jerzy Cieplik
Marcin Stolarczyk
Tadeusz Lis
Jerzy Hanuza
author_sort Wojciech Sąsiadek
collection DOAJ
description The crystal and molecular structures of diethyl 4,4′-disulfanediylbis(6-methyl-2-phenylpyrimidine-5-carboxylate) have been determined by X-ray diffraction and quantum chemical DFT analysis. The title compound crystallizes in orthorhombic Pbca (D2h15) space group, with one molecule in the asymmetric unit. The molecular structure of the studied compound has been determined using the DFT B3LYP/6-311G(2d,2p) approach and compared to that derived from X-ray studies. The IR and Raman spectra have been measured and their wavenumbers have been compared to those calculated for the optimized geometry of the studied compound. The characteristic vibrations of the 4,4′-dithiobispyrimidine N2C4SSC4N2 skeleton have been identified and on this basis the correlation between the disulfide bridge conformation and vibrational data have been discussed. Keywords: Disulfide bond, 6-Methyl-2-phenylpyrimidine derivatives, IR and Raman spectroscopy, X-ray diffraction, Synthesis, Quantum chemical calculation
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spelling doaj.art-41eaa006727342df9284cac0e503a4942022-12-22T02:03:43ZengElsevierArabian Journal of Chemistry1878-53522019-09-01126881896Crystal structure, conformation and vibrational characteristics of diethyl 4,4′-disulfanediylbis(6-methyl-2-phenylpyrimidine-5-carboxylate) – A new pharmaceutical cureWojciech Sąsiadek0Iwona Bryndal1Jadwiga Lorenc2Maciej Ptak3Jerzy Cieplik4Marcin Stolarczyk5Tadeusz Lis6Jerzy Hanuza7Department of Bioorganic Chemistry, Institute of Chemistry and Food Technology, Faculty of Engineering and Economics, Wrocław University of Economics, 118/120 Komandorska, 53-345 Wrocław, Poland; Corresponding author. Tel.: +48 71 3680299; fax: +48 71 3680292.Department of Bioorganic Chemistry, Institute of Chemistry and Food Technology, Faculty of Engineering and Economics, Wrocław University of Economics, 118/120 Komandorska, 53-345 Wrocław, PolandDepartment of Bioorganic Chemistry, Institute of Chemistry and Food Technology, Faculty of Engineering and Economics, Wrocław University of Economics, 118/120 Komandorska, 53-345 Wrocław, PolandInstitute of Low Temperature and Structure Research, Polish Academy of Sciences, 2 Okólna, 50-422 Wrocław, PolandDepartment of Organic Chemistry, Wrocław Medical University, 211 Borowska, 50-556 Wrocław, PolandDepartment of Organic Chemistry, Wrocław Medical University, 211 Borowska, 50-556 Wrocław, PolandFaculty of Chemistry, University of Wrocław, 14 Joliot-Curie, 50-383 Wrocław, PolandInstitute of Low Temperature and Structure Research, Polish Academy of Sciences, 2 Okólna, 50-422 Wrocław, PolandThe crystal and molecular structures of diethyl 4,4′-disulfanediylbis(6-methyl-2-phenylpyrimidine-5-carboxylate) have been determined by X-ray diffraction and quantum chemical DFT analysis. The title compound crystallizes in orthorhombic Pbca (D2h15) space group, with one molecule in the asymmetric unit. The molecular structure of the studied compound has been determined using the DFT B3LYP/6-311G(2d,2p) approach and compared to that derived from X-ray studies. The IR and Raman spectra have been measured and their wavenumbers have been compared to those calculated for the optimized geometry of the studied compound. The characteristic vibrations of the 4,4′-dithiobispyrimidine N2C4SSC4N2 skeleton have been identified and on this basis the correlation between the disulfide bridge conformation and vibrational data have been discussed. Keywords: Disulfide bond, 6-Methyl-2-phenylpyrimidine derivatives, IR and Raman spectroscopy, X-ray diffraction, Synthesis, Quantum chemical calculationhttp://www.sciencedirect.com/science/article/pii/S1878535216300181
spellingShingle Wojciech Sąsiadek
Iwona Bryndal
Jadwiga Lorenc
Maciej Ptak
Jerzy Cieplik
Marcin Stolarczyk
Tadeusz Lis
Jerzy Hanuza
Crystal structure, conformation and vibrational characteristics of diethyl 4,4′-disulfanediylbis(6-methyl-2-phenylpyrimidine-5-carboxylate) – A new pharmaceutical cure
Arabian Journal of Chemistry
title Crystal structure, conformation and vibrational characteristics of diethyl 4,4′-disulfanediylbis(6-methyl-2-phenylpyrimidine-5-carboxylate) – A new pharmaceutical cure
title_full Crystal structure, conformation and vibrational characteristics of diethyl 4,4′-disulfanediylbis(6-methyl-2-phenylpyrimidine-5-carboxylate) – A new pharmaceutical cure
title_fullStr Crystal structure, conformation and vibrational characteristics of diethyl 4,4′-disulfanediylbis(6-methyl-2-phenylpyrimidine-5-carboxylate) – A new pharmaceutical cure
title_full_unstemmed Crystal structure, conformation and vibrational characteristics of diethyl 4,4′-disulfanediylbis(6-methyl-2-phenylpyrimidine-5-carboxylate) – A new pharmaceutical cure
title_short Crystal structure, conformation and vibrational characteristics of diethyl 4,4′-disulfanediylbis(6-methyl-2-phenylpyrimidine-5-carboxylate) – A new pharmaceutical cure
title_sort crystal structure conformation and vibrational characteristics of diethyl 4 4 disulfanediylbis 6 methyl 2 phenylpyrimidine 5 carboxylate a new pharmaceutical cure
url http://www.sciencedirect.com/science/article/pii/S1878535216300181
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