Characterization of the complete chloroplast genome of a well-known Chinese medicinal herb, Scrophularia ningpoensis
Scrophularia ningpoensis has been used as a famous traditional medicinal herb in Asian countries to treat jaundice, dysentery, and the pain of rheumatism. In this paper, the complete chloroplast (cp) genome sequence of S. ningpoensis was reported and characterized. The cp genome is 153,175 bp in len...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1705926 |
| _version_ | 1797639486929108992 |
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| author | Hong-Lian Ai Chun-Lun Qin Ke Ye Zheng-Hui Li |
| author_facet | Hong-Lian Ai Chun-Lun Qin Ke Ye Zheng-Hui Li |
| author_sort | Hong-Lian Ai |
| collection | DOAJ |
| description | Scrophularia ningpoensis has been used as a famous traditional medicinal herb in Asian countries to treat jaundice, dysentery, and the pain of rheumatism. In this paper, the complete chloroplast (cp) genome sequence of S. ningpoensis was reported and characterized. The cp genome is 153,175 bp in length, composed of a pair of 25,490 bp inverted repeat (IR) regions separated by a large single copy (LSC) region of 84,257 bp and a small single copy (SSC) region of 17,938 bp. There were 130 predicted genes (85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes) in the genome, and the overall GC content of the genome is 38%. Phylogenetic analysis based on the cp genome data showed that S. ningpoensis was sister to S. buergeriana. |
| first_indexed | 2024-03-11T13:17:24Z |
| format | Article |
| id | doaj.art-4213428bd868416ba3ca166c749ff853 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:17:24Z |
| publishDate | 2020-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-4213428bd868416ba3ca166c749ff8532023-11-03T11:00:20ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-01-015148448510.1080/23802359.2019.17059261705926Characterization of the complete chloroplast genome of a well-known Chinese medicinal herb, Scrophularia ningpoensisHong-Lian Ai0Chun-Lun Qin1Ke Ye2Zheng-Hui Li3School of Pharmaceutical Sciences, South-Central University for NationalitiesSchool of Pharmaceutical Sciences, South-Central University for NationalitiesSchool of Pharmaceutical Sciences, South-Central University for NationalitiesSchool of Pharmaceutical Sciences, South-Central University for NationalitiesScrophularia ningpoensis has been used as a famous traditional medicinal herb in Asian countries to treat jaundice, dysentery, and the pain of rheumatism. In this paper, the complete chloroplast (cp) genome sequence of S. ningpoensis was reported and characterized. The cp genome is 153,175 bp in length, composed of a pair of 25,490 bp inverted repeat (IR) regions separated by a large single copy (LSC) region of 84,257 bp and a small single copy (SSC) region of 17,938 bp. There were 130 predicted genes (85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes) in the genome, and the overall GC content of the genome is 38%. Phylogenetic analysis based on the cp genome data showed that S. ningpoensis was sister to S. buergeriana.http://dx.doi.org/10.1080/23802359.2019.1705926chloroplast genomemedicinal herbscrophularia ningpoensisphylogenetic analysis |
| spellingShingle | Hong-Lian Ai Chun-Lun Qin Ke Ye Zheng-Hui Li Characterization of the complete chloroplast genome of a well-known Chinese medicinal herb, Scrophularia ningpoensis Mitochondrial DNA. Part B. Resources chloroplast genome medicinal herb scrophularia ningpoensis phylogenetic analysis |
| title | Characterization of the complete chloroplast genome of a well-known Chinese medicinal herb, Scrophularia ningpoensis |
| title_full | Characterization of the complete chloroplast genome of a well-known Chinese medicinal herb, Scrophularia ningpoensis |
| title_fullStr | Characterization of the complete chloroplast genome of a well-known Chinese medicinal herb, Scrophularia ningpoensis |
| title_full_unstemmed | Characterization of the complete chloroplast genome of a well-known Chinese medicinal herb, Scrophularia ningpoensis |
| title_short | Characterization of the complete chloroplast genome of a well-known Chinese medicinal herb, Scrophularia ningpoensis |
| title_sort | characterization of the complete chloroplast genome of a well known chinese medicinal herb scrophularia ningpoensis |
| topic | chloroplast genome medicinal herb scrophularia ningpoensis phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2019.1705926 |
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