The complete chloroplast genome of a medical herb, Potentilla parvifolia Fisch. (Rosaceae), from Qinghai-Tibet Plateau in China
Potentilla parvifolia Fisch. (Rosaceae) is one of the genuine medicinal materials in Qinghai-Tibet Plateau, China. Here we report the first chloroplast (cp) genome of P. parvifolia using Illumina NovaSeq 6000 platform. The length of its complete cp genome is 152,898 bp, containing four sub-regions;...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-02-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1866447 |
| _version_ | 1827772596443152384 |
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| author | Jinping Li Likuan Liu Hongyu Wang Caiming Li Wenming Zuo Yang Zeng |
| author_facet | Jinping Li Likuan Liu Hongyu Wang Caiming Li Wenming Zuo Yang Zeng |
| author_sort | Jinping Li |
| collection | DOAJ |
| description | Potentilla parvifolia Fisch. (Rosaceae) is one of the genuine medicinal materials in Qinghai-Tibet Plateau, China. Here we report the first chloroplast (cp) genome of P. parvifolia using Illumina NovaSeq 6000 platform. The length of its complete cp genome is 152,898 bp, containing four sub-regions; a large single copy region (LSC) of 84,160 bp and a small single copy region (SSC) of 18,128 bp are separated by a pair of inverted repeat regions (IRs) of 25,305bp. The complete cp genome of P. parvifolia contains 130 genes, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content of the cp genome is 37.2%. The phylogenetic analysis, based on 17 cp genomes, suggested that P. parvifolia is closely related to P. fruticosa L. and Fragaria species. |
| first_indexed | 2024-03-11T13:11:29Z |
| format | Article |
| id | doaj.art-4308e30497694450956aeb2cc7743b91 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:11:29Z |
| publishDate | 2021-02-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-4308e30497694450956aeb2cc7743b912023-11-03T14:08:18ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-02-016234935010.1080/23802359.2020.18664471866447The complete chloroplast genome of a medical herb, Potentilla parvifolia Fisch. (Rosaceae), from Qinghai-Tibet Plateau in ChinaJinping Li0Likuan Liu1Hongyu Wang2Caiming Li3Wenming Zuo4Yang Zeng5The College of Biological Science, Qinghai Normal UniversityThe College of Biological Science, Qinghai Normal UniversityThe College of Biological Science, Qinghai Normal UniversityThe College of Biological Science, Qinghai Normal UniversityThe College of Biological Science, Qinghai Normal UniversityThe College of Biological Science, Qinghai Normal UniversityPotentilla parvifolia Fisch. (Rosaceae) is one of the genuine medicinal materials in Qinghai-Tibet Plateau, China. Here we report the first chloroplast (cp) genome of P. parvifolia using Illumina NovaSeq 6000 platform. The length of its complete cp genome is 152,898 bp, containing four sub-regions; a large single copy region (LSC) of 84,160 bp and a small single copy region (SSC) of 18,128 bp are separated by a pair of inverted repeat regions (IRs) of 25,305bp. The complete cp genome of P. parvifolia contains 130 genes, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content of the cp genome is 37.2%. The phylogenetic analysis, based on 17 cp genomes, suggested that P. parvifolia is closely related to P. fruticosa L. and Fragaria species.http://dx.doi.org/10.1080/23802359.2020.1866447potentilla parvifoliachloroplast genomerosaceaeqinghai-tibet plateauphylogenetic trees |
| spellingShingle | Jinping Li Likuan Liu Hongyu Wang Caiming Li Wenming Zuo Yang Zeng The complete chloroplast genome of a medical herb, Potentilla parvifolia Fisch. (Rosaceae), from Qinghai-Tibet Plateau in China Mitochondrial DNA. Part B. Resources potentilla parvifolia chloroplast genome rosaceae qinghai-tibet plateau phylogenetic trees |
| title | The complete chloroplast genome of a medical herb, Potentilla parvifolia Fisch. (Rosaceae), from Qinghai-Tibet Plateau in China |
| title_full | The complete chloroplast genome of a medical herb, Potentilla parvifolia Fisch. (Rosaceae), from Qinghai-Tibet Plateau in China |
| title_fullStr | The complete chloroplast genome of a medical herb, Potentilla parvifolia Fisch. (Rosaceae), from Qinghai-Tibet Plateau in China |
| title_full_unstemmed | The complete chloroplast genome of a medical herb, Potentilla parvifolia Fisch. (Rosaceae), from Qinghai-Tibet Plateau in China |
| title_short | The complete chloroplast genome of a medical herb, Potentilla parvifolia Fisch. (Rosaceae), from Qinghai-Tibet Plateau in China |
| title_sort | complete chloroplast genome of a medical herb potentilla parvifolia fisch rosaceae from qinghai tibet plateau in china |
| topic | potentilla parvifolia chloroplast genome rosaceae qinghai-tibet plateau phylogenetic trees |
| url | http://dx.doi.org/10.1080/23802359.2020.1866447 |
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