Phylogeny and systematics of the genus Clonostachys
IntroductionClonostachys, a genus with rich morphological and ecological diversity in Bionectriaceae, has a wide distribution among diverse habitats.Methods and ResultsIn the present study, a phylogenetic framework is reconstructed for the family Bionectriaceae focusing on Clonostachys through incre...
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Frontiers Media S.A.
2023-03-01
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| Series: | Frontiers in Microbiology |
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| Online Access: | https://www.frontiersin.org/articles/10.3389/fmicb.2023.1117753/full |
| _version_ | 1811160802899525632 |
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| author | Yao Wang Yao Wang De-Xiang Tang De-Xiang Tang Run Luo Run Luo Yuan-Bing Wang Yuan-Bing Wang Chinnapan Thanarut Van-Minh Dao Hong Yu Hong Yu |
| author_facet | Yao Wang Yao Wang De-Xiang Tang De-Xiang Tang Run Luo Run Luo Yuan-Bing Wang Yuan-Bing Wang Chinnapan Thanarut Van-Minh Dao Hong Yu Hong Yu |
| author_sort | Yao Wang |
| collection | DOAJ |
| description | IntroductionClonostachys, a genus with rich morphological and ecological diversity in Bionectriaceae, has a wide distribution among diverse habitats.Methods and ResultsIn the present study, a phylogenetic framework is reconstructed for the family Bionectriaceae focusing on Clonostachys through increased taxon-sampling using the nrLSU sequence. Through surveying Clonostachys in China, Vietnam, and Thailand over the past 3 years, seven Clonostachys spp. were found and identified. Two new species, C. chuyangsinensis and C. kunmingensis, are described and illustrated based on morphological characteristics and molecular data. The phylogenetic positions of the seven species were evaluated based on four genomic loci (ITS, nrLSU, TUB2, and TEF1).DiscussionMoreover, the genetic divergence comparisons of Clonostachys species for three markers (ITS, TUB2, and TEF1) are also provided. The results indicated that the TEF1 sequence data provided the best resolution for distinguishing species of Clonostachys, followed by sequence data for the TUB2 and ITS regions. |
| first_indexed | 2024-04-10T06:03:43Z |
| format | Article |
| id | doaj.art-438fefef6e9a4cbca4c0dac68d074cc9 |
| institution | Directory Open Access Journal |
| issn | 1664-302X |
| language | English |
| last_indexed | 2024-04-10T06:03:43Z |
| publishDate | 2023-03-01 |
| publisher | Frontiers Media S.A. |
| record_format | Article |
| series | Frontiers in Microbiology |
| spelling | doaj.art-438fefef6e9a4cbca4c0dac68d074cc92023-03-03T04:36:27ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2023-03-011410.3389/fmicb.2023.11177531117753Phylogeny and systematics of the genus ClonostachysYao Wang0Yao Wang1De-Xiang Tang2De-Xiang Tang3Run Luo4Run Luo5Yuan-Bing Wang6Yuan-Bing Wang7Chinnapan Thanarut8Van-Minh Dao9Hong Yu10Hong Yu11Yunnan Herbal Laboratory, College of Ecology and Environmental Sciences, Yunnan University, Kunming, ChinaThe International Joint Research Center for Sustainable Utilization of Cordyceps Bioresources in China and Southeast Asia, Yunnan University, Kunming, ChinaYunnan Herbal Laboratory, College of Ecology and Environmental Sciences, Yunnan University, Kunming, ChinaThe International Joint Research Center for Sustainable Utilization of Cordyceps Bioresources in China and Southeast Asia, Yunnan University, Kunming, ChinaYunnan Herbal Laboratory, College of Ecology and Environmental Sciences, Yunnan University, Kunming, ChinaThe International Joint Research Center for Sustainable Utilization of Cordyceps Bioresources in China and Southeast Asia, Yunnan University, Kunming, ChinaYunnan Herbal Laboratory, College of Ecology and Environmental Sciences, Yunnan University, Kunming, ChinaThe International Joint Research Center for Sustainable Utilization of Cordyceps Bioresources in China and Southeast Asia, Yunnan University, Kunming, ChinaFaculty of Agricultural Production, Maejo University, Chiang Mai, ThailandInstitute of Regional Research and Development, Ministry of Science and Technology, Hanoi, VietnamYunnan Herbal Laboratory, College of Ecology and Environmental Sciences, Yunnan University, Kunming, ChinaThe International Joint Research Center for Sustainable Utilization of Cordyceps Bioresources in China and Southeast Asia, Yunnan University, Kunming, ChinaIntroductionClonostachys, a genus with rich morphological and ecological diversity in Bionectriaceae, has a wide distribution among diverse habitats.Methods and ResultsIn the present study, a phylogenetic framework is reconstructed for the family Bionectriaceae focusing on Clonostachys through increased taxon-sampling using the nrLSU sequence. Through surveying Clonostachys in China, Vietnam, and Thailand over the past 3 years, seven Clonostachys spp. were found and identified. Two new species, C. chuyangsinensis and C. kunmingensis, are described and illustrated based on morphological characteristics and molecular data. The phylogenetic positions of the seven species were evaluated based on four genomic loci (ITS, nrLSU, TUB2, and TEF1).DiscussionMoreover, the genetic divergence comparisons of Clonostachys species for three markers (ITS, TUB2, and TEF1) are also provided. The results indicated that the TEF1 sequence data provided the best resolution for distinguishing species of Clonostachys, followed by sequence data for the TUB2 and ITS regions.https://www.frontiersin.org/articles/10.3389/fmicb.2023.1117753/fullBionectriaceaemolecular systematicsmulti-gene phylogenymorphologynew species |
| spellingShingle | Yao Wang Yao Wang De-Xiang Tang De-Xiang Tang Run Luo Run Luo Yuan-Bing Wang Yuan-Bing Wang Chinnapan Thanarut Van-Minh Dao Hong Yu Hong Yu Phylogeny and systematics of the genus Clonostachys Frontiers in Microbiology Bionectriaceae molecular systematics multi-gene phylogeny morphology new species |
| title | Phylogeny and systematics of the genus Clonostachys |
| title_full | Phylogeny and systematics of the genus Clonostachys |
| title_fullStr | Phylogeny and systematics of the genus Clonostachys |
| title_full_unstemmed | Phylogeny and systematics of the genus Clonostachys |
| title_short | Phylogeny and systematics of the genus Clonostachys |
| title_sort | phylogeny and systematics of the genus clonostachys |
| topic | Bionectriaceae molecular systematics multi-gene phylogeny morphology new species |
| url | https://www.frontiersin.org/articles/10.3389/fmicb.2023.1117753/full |
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