Assessing the effectiveness of barcoding for conservation of rare plant species in the Republic of Uzbekistan
This article presents, for the first time, a reference database of the nucleotide sequences for three DNA barcodes (ITS2, matK, and rbcL) of 65 rare and critically endangered plant species of the Republic of Uzbekistan (133 samples, two samples per species), including 23 monocots and 42 dicots. ITS2...
| Main Authors: | , , , , , , , , |
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| Format: | Article |
| Language: | English |
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Kazan Federal University
2022-09-01
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| Series: | Učënye Zapiski Kazanskogo Universiteta. Seriâ Estestvennye Nauki |
| Subjects: | |
| Online Access: | https://kpfu.ru/uz-eng-ns-2022-3-5.html |
| _version_ | 1797826681606504448 |
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| author | F.U. Mustafina D.N. Jamalova D.E. Turdiev G.T. Kurbaniyazova A.Dj. Gaziev N.Yu. Beshko K.Sh. Tojibaev Z.Z. Ibragimov K.T. Boboev |
| author_facet | F.U. Mustafina D.N. Jamalova D.E. Turdiev G.T. Kurbaniyazova A.Dj. Gaziev N.Yu. Beshko K.Sh. Tojibaev Z.Z. Ibragimov K.T. Boboev |
| author_sort | F.U. Mustafina |
| collection | DOAJ |
| description | This article presents, for the first time, a reference database of the nucleotide sequences for three DNA barcodes (ITS2, matK, and rbcL) of 65 rare and critically endangered plant species of the Republic of Uzbekistan (133 samples, two samples per species), including 23 monocots and 42 dicots. ITS2 region was proposed as the most variable, easily amplified and sequenced for both monocot and dicot species. Therefore, it was recommended as the main DNA barcode. The obtained reference database uploaded to the BOLD v4 platform should be useful for pharmaceutical companies, environmental and customs offices, as well as for phylogenetic research. |
| first_indexed | 2024-04-09T12:36:18Z |
| format | Article |
| id | doaj.art-43959d4075bb4cd6b2801d843d9ff55a |
| institution | Directory Open Access Journal |
| issn | 2542-064X 2500-218X |
| language | English |
| last_indexed | 2024-04-09T12:36:18Z |
| publishDate | 2022-09-01 |
| publisher | Kazan Federal University |
| record_format | Article |
| series | Učënye Zapiski Kazanskogo Universiteta. Seriâ Estestvennye Nauki |
| spelling | doaj.art-43959d4075bb4cd6b2801d843d9ff55a2023-05-15T11:14:59ZengKazan Federal UniversityUčënye Zapiski Kazanskogo Universiteta. Seriâ Estestvennye Nauki2542-064X2500-218X2022-09-01164340843710.26907/2542-064X.2022.3.408-437Assessing the effectiveness of barcoding for conservation of rare plant species in the Republic of UzbekistanF.U. Mustafina0D.N. Jamalova1D.E. Turdiev2G.T. Kurbaniyazova3A.Dj. Gaziev4N.Yu. Beshko5K.Sh. Tojibaev6Z.Z. Ibragimov7K.T. Boboev8Institute of Botany, Academy of Sciences of the Republic of Uzbekistan, Tashkent, 100125 Republic of UzbekistanInstitute of Botany, Academy of Sciences of the Republic of Uzbekistan, Tashkent, 100125 Republic of UzbekistanInstitute of Botany, Academy of Sciences of the Republic of Uzbekistan, Tashkent, 100125 Republic of UzbekistanInstitute of Botany, Academy of Sciences of the Republic of Uzbekistan, Tashkent, 100125 Republic of UzbekistanInstitute of Botany, Academy of Sciences of the Republic of Uzbekistan, Tashkent, 100125 Republic of UzbekistanInstitute of Botany, Academy of Sciences of the Republic of Uzbekistan, Tashkent, 100125 Republic of UzbekistanInstitute of Botany, Academy of Sciences of the Republic of Uzbekistan, Tashkent, 100125 Republic of UzbekistanA.S. Sadykov Institute of Bioorganic Chemistry, Academy of Sciences of the Republic of Uzbekistan, Tashkent, 100143 Republic of UzbekistanResearch Institute of Hematology and Blood Transfusion of the Ministry of Health of the Republic of Uzbekistan, Tashkent, 100097 UzbekistanThis article presents, for the first time, a reference database of the nucleotide sequences for three DNA barcodes (ITS2, matK, and rbcL) of 65 rare and critically endangered plant species of the Republic of Uzbekistan (133 samples, two samples per species), including 23 monocots and 42 dicots. ITS2 region was proposed as the most variable, easily amplified and sequenced for both monocot and dicot species. Therefore, it was recommended as the main DNA barcode. The obtained reference database uploaded to the BOLD v4 platform should be useful for pharmaceutical companies, environmental and customs offices, as well as for phylogenetic research.https://kpfu.ru/uz-eng-ns-2022-3-5.htmlbarcodingrare speciesendemicsbiodiversity conservationbold |
| spellingShingle | F.U. Mustafina D.N. Jamalova D.E. Turdiev G.T. Kurbaniyazova A.Dj. Gaziev N.Yu. Beshko K.Sh. Tojibaev Z.Z. Ibragimov K.T. Boboev Assessing the effectiveness of barcoding for conservation of rare plant species in the Republic of Uzbekistan Učënye Zapiski Kazanskogo Universiteta. Seriâ Estestvennye Nauki barcoding rare species endemics biodiversity conservation bold |
| title | Assessing the effectiveness of barcoding for conservation of rare plant species in the Republic of Uzbekistan |
| title_full | Assessing the effectiveness of barcoding for conservation of rare plant species in the Republic of Uzbekistan |
| title_fullStr | Assessing the effectiveness of barcoding for conservation of rare plant species in the Republic of Uzbekistan |
| title_full_unstemmed | Assessing the effectiveness of barcoding for conservation of rare plant species in the Republic of Uzbekistan |
| title_short | Assessing the effectiveness of barcoding for conservation of rare plant species in the Republic of Uzbekistan |
| title_sort | assessing the effectiveness of barcoding for conservation of rare plant species in the republic of uzbekistan |
| topic | barcoding rare species endemics biodiversity conservation bold |
| url | https://kpfu.ru/uz-eng-ns-2022-3-5.html |
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