The complete chloroplast genome of Pollia japonica (Commelinaceae) from Southeast China
The complete chloroplast genome of Pollia japonica, a medicinal herb native to East Asia was characterized. The size of the chloroplast genome is 165,076 bp in length with a large single copy (LSC) of 90,722 bp, a small single copy (SSC) of 19,146 bp, and a pair of inverted repeats of 27,604 bp. The...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-04-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1911717 |
| _version_ | 1827772506405076992 |
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| author | Ye Gu Qing Ma |
| author_facet | Ye Gu Qing Ma |
| author_sort | Ye Gu |
| collection | DOAJ |
| description | The complete chloroplast genome of Pollia japonica, a medicinal herb native to East Asia was characterized. The size of the chloroplast genome is 165,076 bp in length with a large single copy (LSC) of 90,722 bp, a small single copy (SSC) of 19,146 bp, and a pair of inverted repeats of 27,604 bp. The chloroplast genome encodes a set of 131 genes, including 85 protein-coding, 38 tRNAs, and 8 rRNAs. Phylogenetic analysis based on complete chloroplast genomes validated the phylogenetic position of P. japonica and showed that the six species from Commelinales were fully resolved in a monophyletic clade sister to the Zingiberales. Species from the Zingiberales and Commelinales formed a molophyletic group sister to the Poales. The chloroplast genome of P. japonica provides an important resource for further study of molecular evolution in the Commelinaceae. |
| first_indexed | 2024-03-11T13:09:30Z |
| format | Article |
| id | doaj.art-446c4efb90f44bc4a8af31f48f9d9a29 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:09:30Z |
| publishDate | 2021-04-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-446c4efb90f44bc4a8af31f48f9d9a292023-11-03T14:16:09ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-04-01641486148710.1080/23802359.2021.19117171911717The complete chloroplast genome of Pollia japonica (Commelinaceae) from Southeast ChinaYe Gu0Qing Ma1Department of Gastroenterology, Key Laboratory of Clinical Cancer Pharmacology and Toxicology Research of Zhejiang Province, Affiliated Hangzhou First People's Hospital, Zhejiang University School of MedicineCollege of Biological and Environmental Engineering, Zhejiang Shuren UniversityThe complete chloroplast genome of Pollia japonica, a medicinal herb native to East Asia was characterized. The size of the chloroplast genome is 165,076 bp in length with a large single copy (LSC) of 90,722 bp, a small single copy (SSC) of 19,146 bp, and a pair of inverted repeats of 27,604 bp. The chloroplast genome encodes a set of 131 genes, including 85 protein-coding, 38 tRNAs, and 8 rRNAs. Phylogenetic analysis based on complete chloroplast genomes validated the phylogenetic position of P. japonica and showed that the six species from Commelinales were fully resolved in a monophyletic clade sister to the Zingiberales. Species from the Zingiberales and Commelinales formed a molophyletic group sister to the Poales. The chloroplast genome of P. japonica provides an important resource for further study of molecular evolution in the Commelinaceae.http://dx.doi.org/10.1080/23802359.2021.1911717chloroplast genomecommelinalesphylogenypollia japonica |
| spellingShingle | Ye Gu Qing Ma The complete chloroplast genome of Pollia japonica (Commelinaceae) from Southeast China Mitochondrial DNA. Part B. Resources chloroplast genome commelinales phylogeny pollia japonica |
| title | The complete chloroplast genome of Pollia japonica (Commelinaceae) from Southeast China |
| title_full | The complete chloroplast genome of Pollia japonica (Commelinaceae) from Southeast China |
| title_fullStr | The complete chloroplast genome of Pollia japonica (Commelinaceae) from Southeast China |
| title_full_unstemmed | The complete chloroplast genome of Pollia japonica (Commelinaceae) from Southeast China |
| title_short | The complete chloroplast genome of Pollia japonica (Commelinaceae) from Southeast China |
| title_sort | complete chloroplast genome of pollia japonica commelinaceae from southeast china |
| topic | chloroplast genome commelinales phylogeny pollia japonica |
| url | http://dx.doi.org/10.1080/23802359.2021.1911717 |
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