DNA barcoding of Cloridopsis immaculata: genetic distance and phylogeny of stomatopods
The changes of coastal topography might have genetically altered the extant species diversity in Chilika Lake. The genetic assessment of stomatopods has never been attempted from this ecosystem. The study generate the first genetic information (mtCOI) of Cloridopsis immaculata. DNA sequences of C. i...
| Main Authors: | , , , , , , |
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| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2018-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2018.1507632 |
| _version_ | 1797640601329467392 |
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| author | Shantanu Kundu Shibananda Rath Kaomud Tyagi Rajasree Chakraborty Avas Pakrashi Vikas Kumar Kailash Chandra |
| author_facet | Shantanu Kundu Shibananda Rath Kaomud Tyagi Rajasree Chakraborty Avas Pakrashi Vikas Kumar Kailash Chandra |
| author_sort | Shantanu Kundu |
| collection | DOAJ |
| description | The changes of coastal topography might have genetically altered the extant species diversity in Chilika Lake. The genetic assessment of stomatopods has never been attempted from this ecosystem. The study generate the first genetic information (mtCOI) of Cloridopsis immaculata. DNA sequences of C. immaculata shows 12.9% genetic divergence with Harpiosquilla harpax and clade as sister species in NJ tree. Alima, Harpiosquilla, and Oratosquilla shows high congeneric/conspecific genetic divergence (20.9%, 15.7%, and 7.2%) and cladded separately in the phylogeny; correlate to their diverse populations. We recommend more extensive survey of stomatopods and generation of molecular data to resolve the taxonomic uncertainty. |
| first_indexed | 2024-03-11T13:34:14Z |
| format | Article |
| id | doaj.art-44ce463ff8f140f4b60ae5c0da73bee3 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:34:14Z |
| publishDate | 2018-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-44ce463ff8f140f4b60ae5c0da73bee32023-11-02T15:57:25ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592018-07-013295595810.1080/23802359.2018.15076321507632DNA barcoding of Cloridopsis immaculata: genetic distance and phylogeny of stomatopodsShantanu Kundu0Shibananda Rath1Kaomud Tyagi2Rajasree Chakraborty3Avas Pakrashi4Vikas Kumar5Kailash Chandra6Zoological Survey of IndiaZoological Survey of IndiaZoological Survey of IndiaZoological Survey of IndiaZoological Survey of IndiaZoological Survey of IndiaZoological Survey of IndiaThe changes of coastal topography might have genetically altered the extant species diversity in Chilika Lake. The genetic assessment of stomatopods has never been attempted from this ecosystem. The study generate the first genetic information (mtCOI) of Cloridopsis immaculata. DNA sequences of C. immaculata shows 12.9% genetic divergence with Harpiosquilla harpax and clade as sister species in NJ tree. Alima, Harpiosquilla, and Oratosquilla shows high congeneric/conspecific genetic divergence (20.9%, 15.7%, and 7.2%) and cladded separately in the phylogeny; correlate to their diverse populations. We recommend more extensive survey of stomatopods and generation of molecular data to resolve the taxonomic uncertainty.http://dx.doi.org/10.1080/23802359.2018.1507632chilika lakemantis shrimpsmtcoigenetic traitsphylogeny |
| spellingShingle | Shantanu Kundu Shibananda Rath Kaomud Tyagi Rajasree Chakraborty Avas Pakrashi Vikas Kumar Kailash Chandra DNA barcoding of Cloridopsis immaculata: genetic distance and phylogeny of stomatopods Mitochondrial DNA. Part B. Resources chilika lake mantis shrimps mtcoi genetic traits phylogeny |
| title | DNA barcoding of Cloridopsis immaculata: genetic distance and phylogeny of stomatopods |
| title_full | DNA barcoding of Cloridopsis immaculata: genetic distance and phylogeny of stomatopods |
| title_fullStr | DNA barcoding of Cloridopsis immaculata: genetic distance and phylogeny of stomatopods |
| title_full_unstemmed | DNA barcoding of Cloridopsis immaculata: genetic distance and phylogeny of stomatopods |
| title_short | DNA barcoding of Cloridopsis immaculata: genetic distance and phylogeny of stomatopods |
| title_sort | dna barcoding of cloridopsis immaculata genetic distance and phylogeny of stomatopods |
| topic | chilika lake mantis shrimps mtcoi genetic traits phylogeny |
| url | http://dx.doi.org/10.1080/23802359.2018.1507632 |
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