The complete chloroplast genome of Vancouveria planipetala, with implication for the phylogeny of Ranunculales
Vancouveria planipetala (Berberidaceae) is a perennial herb which has high ornamental and ecological values. In this study, we assembled the complete chloroplast (cp) genome of V. planipetala. The whole cp genome of V. planipetala is 156,871 bp in length, comprising a pair of inverted repeat (IR) re...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2018-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2018.1473726 |
| _version_ | 1827774207632605184 |
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| author | Zhenyu Jin Jocelyn M. Losh Wenqing Ye Pan Li |
| author_facet | Zhenyu Jin Jocelyn M. Losh Wenqing Ye Pan Li |
| author_sort | Zhenyu Jin |
| collection | DOAJ |
| description | Vancouveria planipetala (Berberidaceae) is a perennial herb which has high ornamental and ecological values. In this study, we assembled the complete chloroplast (cp) genome of V. planipetala. The whole cp genome of V. planipetala is 156,871 bp in length, comprising a pair of inverted repeat (IR) regions (25,888 bp) separated by a large single copy (LSC) region (88,321 bp) and a small single copy (SSC) region (16,772 bp). The cp genome contains 114 unique genes, including 80 protein-coding genes, 30 tRNA, and four rRNA genes, with 17 genes duplicated in IRs. Phylogenetic analyses showed that Papaveraceae is the basal group of Ranunculales. |
| first_indexed | 2024-03-11T13:35:13Z |
| format | Article |
| id | doaj.art-44e8873a711a416e80648c18292fd2fa |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:35:13Z |
| publishDate | 2018-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-44e8873a711a416e80648c18292fd2fa2023-11-02T15:57:23ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592018-07-013262862910.1080/23802359.2018.14737261473726The complete chloroplast genome of Vancouveria planipetala, with implication for the phylogeny of RanunculalesZhenyu Jin0Jocelyn M. Losh1Wenqing Ye2Pan Li3Zhejiang UniversityZhejiang UniversityZhejiang UniversityZhejiang UniversityVancouveria planipetala (Berberidaceae) is a perennial herb which has high ornamental and ecological values. In this study, we assembled the complete chloroplast (cp) genome of V. planipetala. The whole cp genome of V. planipetala is 156,871 bp in length, comprising a pair of inverted repeat (IR) regions (25,888 bp) separated by a large single copy (LSC) region (88,321 bp) and a small single copy (SSC) region (16,772 bp). The cp genome contains 114 unique genes, including 80 protein-coding genes, 30 tRNA, and four rRNA genes, with 17 genes duplicated in IRs. Phylogenetic analyses showed that Papaveraceae is the basal group of Ranunculales.http://dx.doi.org/10.1080/23802359.2018.1473726basal groupberberidaceaeepimediumeupteleaceaepapaveraceae |
| spellingShingle | Zhenyu Jin Jocelyn M. Losh Wenqing Ye Pan Li The complete chloroplast genome of Vancouveria planipetala, with implication for the phylogeny of Ranunculales Mitochondrial DNA. Part B. Resources basal group berberidaceae epimedium eupteleaceae papaveraceae |
| title | The complete chloroplast genome of Vancouveria planipetala, with implication for the phylogeny of Ranunculales |
| title_full | The complete chloroplast genome of Vancouveria planipetala, with implication for the phylogeny of Ranunculales |
| title_fullStr | The complete chloroplast genome of Vancouveria planipetala, with implication for the phylogeny of Ranunculales |
| title_full_unstemmed | The complete chloroplast genome of Vancouveria planipetala, with implication for the phylogeny of Ranunculales |
| title_short | The complete chloroplast genome of Vancouveria planipetala, with implication for the phylogeny of Ranunculales |
| title_sort | complete chloroplast genome of vancouveria planipetala with implication for the phylogeny of ranunculales |
| topic | basal group berberidaceae epimedium eupteleaceae papaveraceae |
| url | http://dx.doi.org/10.1080/23802359.2018.1473726 |
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