Complete chloroplast genome of Paphiopedilum emersonii (Orchidaceae)
Paphiopedilum emersonii is an endemic terrestrial orchid in China. In this study, the chloroplast genome of P. emersonii was determined from BGISEQ-500 sequencing data. The total chloroplast genome was 162,590 bp in length, consisting of a large single-copy region (LSC, 87,852 bp), a small single-co...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1827069 |
| _version_ | 1797639065160384512 |
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| author | Feng-Luan Tang Li-Li Deng Hui-Zhen Qin Yan-Cai Shi |
| author_facet | Feng-Luan Tang Li-Li Deng Hui-Zhen Qin Yan-Cai Shi |
| author_sort | Feng-Luan Tang |
| collection | DOAJ |
| description | Paphiopedilum emersonii is an endemic terrestrial orchid in China. In this study, the chloroplast genome of P. emersonii was determined from BGISEQ-500 sequencing data. The total chloroplast genome was 162,590 bp in length, consisting of a large single-copy region (LSC, 87,852 bp), a small single-copy region (SSC, 870 bp), and two inverted repeat regions (IRA and IRB, 36,934 bp, each). The complete chloroplast genome contains 131 genes, including 81 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. In addition, the phylogenetic analysis indicates that P. emersonii was sister to Paphiopedilum micranthum. The chloroplast genome will contribute to the research and conservation of P. emersonii. |
| first_indexed | 2024-03-11T13:11:29Z |
| format | Article |
| id | doaj.art-4526f4ca1cd544eba8e74ad638137bfa |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:11:29Z |
| publishDate | 2020-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-4526f4ca1cd544eba8e74ad638137bfa2023-11-03T14:08:15ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-07-01533500350110.1080/23802359.2020.18270691827069Complete chloroplast genome of Paphiopedilum emersonii (Orchidaceae)Feng-Luan Tang0Li-Li Deng1Hui-Zhen Qin2Yan-Cai Shi3Guangxi Key Laboratory of Functional Phytochemicals Research and Utilization, Guangxi Institute of Botany, Guangxi Zhuang Autonomous Region and Chinese Academy of SciencesGuangxi Key Laboratory of Functional Phytochemicals Research and Utilization, Guangxi Institute of Botany, Guangxi Zhuang Autonomous Region and Chinese Academy of SciencesGuangxi Key Laboratory of Functional Phytochemicals Research and Utilization, Guangxi Institute of Botany, Guangxi Zhuang Autonomous Region and Chinese Academy of SciencesGuangxi Key Laboratory of Functional Phytochemicals Research and Utilization, Guangxi Institute of Botany, Guangxi Zhuang Autonomous Region and Chinese Academy of SciencesPaphiopedilum emersonii is an endemic terrestrial orchid in China. In this study, the chloroplast genome of P. emersonii was determined from BGISEQ-500 sequencing data. The total chloroplast genome was 162,590 bp in length, consisting of a large single-copy region (LSC, 87,852 bp), a small single-copy region (SSC, 870 bp), and two inverted repeat regions (IRA and IRB, 36,934 bp, each). The complete chloroplast genome contains 131 genes, including 81 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. In addition, the phylogenetic analysis indicates that P. emersonii was sister to Paphiopedilum micranthum. The chloroplast genome will contribute to the research and conservation of P. emersonii.http://dx.doi.org/10.1080/23802359.2020.1827069paphiopedilum emersoniiorchidchloroplast genomephylogenetic analysis |
| spellingShingle | Feng-Luan Tang Li-Li Deng Hui-Zhen Qin Yan-Cai Shi Complete chloroplast genome of Paphiopedilum emersonii (Orchidaceae) Mitochondrial DNA. Part B. Resources paphiopedilum emersonii orchid chloroplast genome phylogenetic analysis |
| title | Complete chloroplast genome of Paphiopedilum emersonii (Orchidaceae) |
| title_full | Complete chloroplast genome of Paphiopedilum emersonii (Orchidaceae) |
| title_fullStr | Complete chloroplast genome of Paphiopedilum emersonii (Orchidaceae) |
| title_full_unstemmed | Complete chloroplast genome of Paphiopedilum emersonii (Orchidaceae) |
| title_short | Complete chloroplast genome of Paphiopedilum emersonii (Orchidaceae) |
| title_sort | complete chloroplast genome of paphiopedilum emersonii orchidaceae |
| topic | paphiopedilum emersonii orchid chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2020.1827069 |
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