Autosomal Dominantly Inherited GREB1L Variants in Individuals with Profound Sensorineural Hearing Impairment

Congenital hearing impairment is a sensory disorder that is genetically highly heterogeneous. By performing exome sequencing in two families with congenital nonsyndromic profound sensorineural hearing loss (SNHL), we identified autosomal dominantly inherited missense variants [p.(Asn283Ser); p.(Thr1...

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Main Authors: Isabelle Schrauwen, Khurram Liaqat, Isabelle Schatteman, Thashi Bharadwaj, Abdul Nasir, Anushree Acharya, Wasim Ahmad, Guy Van Camp, Suzanne M. Leal
Format: Article
Language:English
Published: MDPI AG 2020-06-01
Series:Genes
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Online Access:https://www.mdpi.com/2073-4425/11/6/687
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author Isabelle Schrauwen
Khurram Liaqat
Isabelle Schatteman
Thashi Bharadwaj
Abdul Nasir
Anushree Acharya
Wasim Ahmad
Guy Van Camp
Suzanne M. Leal
author_facet Isabelle Schrauwen
Khurram Liaqat
Isabelle Schatteman
Thashi Bharadwaj
Abdul Nasir
Anushree Acharya
Wasim Ahmad
Guy Van Camp
Suzanne M. Leal
author_sort Isabelle Schrauwen
collection DOAJ
description Congenital hearing impairment is a sensory disorder that is genetically highly heterogeneous. By performing exome sequencing in two families with congenital nonsyndromic profound sensorineural hearing loss (SNHL), we identified autosomal dominantly inherited missense variants [p.(Asn283Ser); p.(Thr116Ile)] in <i>GREB1L</i>, a neural crest regulatory molecule. The p.(Thr116Ile) variant was also associated with bilateral cochlear aplasia and cochlear nerve aplasia upon temporal bone imaging, an ultra-rare phenotype previously seen in patients with de novo <i>GREB1L</i> variants. An important role of GREB1L in normal ear development has also been demonstrated by <i>greb1l</i><sup>−/−</sup> zebrafish, which show an abnormal sensory epithelia innervation. Last, we performed a review of all disease-associated variation described in <i>GREB1L</i>, as it has also been implicated in renal, bladder and genital malformations. We show that the spectrum of features associated with <i>GREB1L</i> is broad, variable and with a high level of reduced penetrance, which is typically characteristic of neurocristopathies. So far, seven <i>GREB1L</i> variants (14%) have been associated with ear-related abnormalities. In conclusion, these results show that autosomal dominantly inherited variants in <i>GREB1L</i> cause profound SNHL. Furthermore, we provide an overview of the phenotypic spectrum associated with <i>GREB1L</i> variants and strengthen the evidence of the involvement of <i>GREB1L</i> in human hearing.
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spelling doaj.art-4535190296da4481867787f794e0f1e42023-11-20T04:41:44ZengMDPI AGGenes2073-44252020-06-0111668710.3390/genes11060687Autosomal Dominantly Inherited GREB1L Variants in Individuals with Profound Sensorineural Hearing ImpairmentIsabelle Schrauwen0Khurram Liaqat1Isabelle Schatteman2Thashi Bharadwaj3Abdul Nasir4Anushree Acharya5Wasim Ahmad6Guy Van Camp7Suzanne M. Leal8Center for Statistical Genetics, Sergievsky Center, Taub Institute for Alzheimer’s Disease and the Aging Brain, and the Department of Neurology, Columbia University Medical Center, New York, NY 10032, USADepartment of Biotechnology, Faculty of Biological Sciences, Quaid-i-Azam University, Islamabad 45320, PakistanDepartment of ENT, St-Augustinus Hospital Antwerp, 2610 Antwerp, BelgiumCenter for Statistical Genetics, Sergievsky Center, Taub Institute for Alzheimer’s Disease and the Aging Brain, and the Department of Neurology, Columbia University Medical Center, New York, NY 10032, USASynthetic Protein Engineering Lab (SPEL), Department of Molecular Science and Technology, Ajou University, Suwon 443-749, KoreaCenter for Statistical Genetics, Sergievsky Center, Taub Institute for Alzheimer’s Disease and the Aging Brain, and the Department of Neurology, Columbia University Medical Center, New York, NY 10032, USADepartment of Biochemistry, Faculty of Biological Sciences, Quaid-i-Azam University, Islamabad 45320, PakistanCenter of Medical Genetics, University of Antwerp & Antwerp University Hospital, 2650 Antwerp, BelgiumCenter for Statistical Genetics, Sergievsky Center, Taub Institute for Alzheimer’s Disease and the Aging Brain, and the Department of Neurology, Columbia University Medical Center, New York, NY 10032, USACongenital hearing impairment is a sensory disorder that is genetically highly heterogeneous. By performing exome sequencing in two families with congenital nonsyndromic profound sensorineural hearing loss (SNHL), we identified autosomal dominantly inherited missense variants [p.(Asn283Ser); p.(Thr116Ile)] in <i>GREB1L</i>, a neural crest regulatory molecule. The p.(Thr116Ile) variant was also associated with bilateral cochlear aplasia and cochlear nerve aplasia upon temporal bone imaging, an ultra-rare phenotype previously seen in patients with de novo <i>GREB1L</i> variants. An important role of GREB1L in normal ear development has also been demonstrated by <i>greb1l</i><sup>−/−</sup> zebrafish, which show an abnormal sensory epithelia innervation. Last, we performed a review of all disease-associated variation described in <i>GREB1L</i>, as it has also been implicated in renal, bladder and genital malformations. We show that the spectrum of features associated with <i>GREB1L</i> is broad, variable and with a high level of reduced penetrance, which is typically characteristic of neurocristopathies. So far, seven <i>GREB1L</i> variants (14%) have been associated with ear-related abnormalities. In conclusion, these results show that autosomal dominantly inherited variants in <i>GREB1L</i> cause profound SNHL. Furthermore, we provide an overview of the phenotypic spectrum associated with <i>GREB1L</i> variants and strengthen the evidence of the involvement of <i>GREB1L</i> in human hearing.https://www.mdpi.com/2073-4425/11/6/687autosomal dominant inheritanceexome sequencing<i>GREB1L</i>profound nonsyndromic hearing impairmentcochlear aplasiacochlear nerve aplasia
spellingShingle Isabelle Schrauwen
Khurram Liaqat
Isabelle Schatteman
Thashi Bharadwaj
Abdul Nasir
Anushree Acharya
Wasim Ahmad
Guy Van Camp
Suzanne M. Leal
Autosomal Dominantly Inherited GREB1L Variants in Individuals with Profound Sensorineural Hearing Impairment
Genes
autosomal dominant inheritance
exome sequencing
<i>GREB1L</i>
profound nonsyndromic hearing impairment
cochlear aplasia
cochlear nerve aplasia
title Autosomal Dominantly Inherited GREB1L Variants in Individuals with Profound Sensorineural Hearing Impairment
title_full Autosomal Dominantly Inherited GREB1L Variants in Individuals with Profound Sensorineural Hearing Impairment
title_fullStr Autosomal Dominantly Inherited GREB1L Variants in Individuals with Profound Sensorineural Hearing Impairment
title_full_unstemmed Autosomal Dominantly Inherited GREB1L Variants in Individuals with Profound Sensorineural Hearing Impairment
title_short Autosomal Dominantly Inherited GREB1L Variants in Individuals with Profound Sensorineural Hearing Impairment
title_sort autosomal dominantly inherited greb1l variants in individuals with profound sensorineural hearing impairment
topic autosomal dominant inheritance
exome sequencing
<i>GREB1L</i>
profound nonsyndromic hearing impairment
cochlear aplasia
cochlear nerve aplasia
url https://www.mdpi.com/2073-4425/11/6/687
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