Competitive mapping allows for the identification and exclusion of human DNA contamination in ancient faunal genomic datasets
Abstract Background After over a decade of developments in field collection, laboratory methods and advances in high-throughput sequencing, contamination remains a key issue in ancient DNA research. Currently, human and microbial contaminant DNA still impose challenges on cost-effective sequencing a...
Main Authors: | Tatiana R. Feuerborn, Eleftheria Palkopoulou, Tom van der Valk, Johanna von Seth, Arielle R. Munters, Patrícia Pečnerová, Marianne Dehasque, Irene Ureña, Erik Ersmark, Vendela Kempe Lagerholm, Maja Krzewińska, Ricardo Rodríguez-Varela, Anders Götherström, Love Dalén, David Díez-del-Molino |
---|---|
Format: | Article |
Language: | English |
Published: |
BMC
2020-11-01
|
Series: | BMC Genomics |
Subjects: | |
Online Access: | https://doi.org/10.1186/s12864-020-07229-y |
Similar Items
-
Development and Optimization of a Silica Column-Based Extraction Protocol for Ancient DNA
by: Marianne Dehasque, et al.
Published: (2022-04-01) -
Genomic approaches and their contributions to understanding the European Neolithisation
by: Cristina Gamba
Published: (2016-12-01) -
Reproducible, portable, and efficient ancient genome reconstruction with nf-core/eager
by: James A. Fellows Yates, et al.
Published: (2021-03-01) -
Zooarchaeology and Ancient DNA, part 1: a brief review of the methods and applications
by: Aurélie Manin, et al.
Published: (2021-03-01) -
Interpreting patterns in transcriptomes and ancient DNA from Next Generation Sequencing data
by: Lin, AT
Published: (2019)