BioDinamica: a toolkit for analyses of biodiversity and biogeography on the Dinamica-EGO modelling platform

Biogeography and macroecology are at the heart of the debate on ecology and evolution. We have developed the BioDinamica package, a suite of user-friendly graphical programs for analysing spatial patterns of biogeography and macroecology. BioDinamica includes analyses of beta-diversity, species rich...

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Bibliographic Details
Main Authors: Ubirajara Oliveira, Britaldo Soares-Filho, Rômulo Fernandes Machado Leitão, Hermann O. Rodrigues
Format: Article
Language:English
Published: PeerJ Inc. 2019-07-01
Series:PeerJ
Subjects:
Online Access:https://peerj.com/articles/7213.pdf
Description
Summary:Biogeography and macroecology are at the heart of the debate on ecology and evolution. We have developed the BioDinamica package, a suite of user-friendly graphical programs for analysing spatial patterns of biogeography and macroecology. BioDinamica includes analyses of beta-diversity, species richness, endemicity, phylo-diversity, species distribution models, predictive models of biodiversity patterns, and several tools for spatial biodiversity analysis. BioDinamica consists of a sub-library of Dinamica-EGO operators developed by integrating EGO native functions with R scripts. The BioDinamica operators can be assembled to create complex analytical and simulation models through the EGO graphical programming interface. In addition, we make available “Wizard” tutorials for end users. BioDinamica can be downloaded free of charge from the Dinamica EGO submodel store. The tools made available in BioDinamica not only facilitate complex biodiversity analyses, they also help develop state-of-the-art spatial models for biogeography and macroecology studies.
ISSN:2167-8359