The mitochondrial genome of Phyllodiaptomus tunguidus Shen & Tai, 1964 (Copepoda, Calanoida) and its phylogeny
The mitochondrial genome of Phyllodiaptomus diaptomus was sequenced and assembled via Next-Generation Sequencing (NGS) and iterative assembly with a reference seed. The genome is 16446 bp long, A + T biased (69.4%), with 13 protein-coding genes, 22 tRNAs, and 2 rRNA. All protein-coding genes are ini...
| Main Authors: | , , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1763863 |
| _version_ | 1797639203434004480 |
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| author | Xiaoli Zhang Shaolin Xu Ping Liu Qi Huang Huiming Li Henri J. Dumont Bo-Ping Han |
| author_facet | Xiaoli Zhang Shaolin Xu Ping Liu Qi Huang Huiming Li Henri J. Dumont Bo-Ping Han |
| author_sort | Xiaoli Zhang |
| collection | DOAJ |
| description | The mitochondrial genome of Phyllodiaptomus diaptomus was sequenced and assembled via Next-Generation Sequencing (NGS) and iterative assembly with a reference seed. The genome is 16446 bp long, A + T biased (69.4%), with 13 protein-coding genes, 22 tRNAs, and 2 rRNA. All protein-coding genes are initiated by a typical “ATN” codon. ND1, ND2, ATP6 genes are terminated with “TAG”, the other 10 genes are terminated with “TAA”. This is the first complete mitogenome published in the Diaptomidae. It provides molecular information useful to a better understanding of the phylogeny of calanoids. |
| first_indexed | 2024-03-11T13:14:32Z |
| format | Article |
| id | doaj.art-469bd7d8fcb94650b67f1229195f8388 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:14:32Z |
| publishDate | 2020-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-469bd7d8fcb94650b67f1229195f83882023-11-03T13:50:21ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-07-01532521252210.1080/23802359.2020.17638631763863The mitochondrial genome of Phyllodiaptomus tunguidus Shen & Tai, 1964 (Copepoda, Calanoida) and its phylogenyXiaoli Zhang0Shaolin Xu1Ping Liu2Qi Huang3Huiming Li4Henri J. Dumont5Bo-Ping Han6Department of Ecology, Jinan UniversityDepartment of Ecology, Jinan UniversityDepartment of Ecology, Jinan UniversityDepartment of Ecology, Jinan UniversityDepartment of Ecology, Jinan UniversityDepartment of Ecology, Jinan UniversityDepartment of Ecology, Jinan UniversityThe mitochondrial genome of Phyllodiaptomus diaptomus was sequenced and assembled via Next-Generation Sequencing (NGS) and iterative assembly with a reference seed. The genome is 16446 bp long, A + T biased (69.4%), with 13 protein-coding genes, 22 tRNAs, and 2 rRNA. All protein-coding genes are initiated by a typical “ATN” codon. ND1, ND2, ATP6 genes are terminated with “TAG”, the other 10 genes are terminated with “TAA”. This is the first complete mitogenome published in the Diaptomidae. It provides molecular information useful to a better understanding of the phylogeny of calanoids.http://dx.doi.org/10.1080/23802359.2020.1763863freshwater copepodphyllodiaptomus tunguidusmitogenomephylogenetic analysis |
| spellingShingle | Xiaoli Zhang Shaolin Xu Ping Liu Qi Huang Huiming Li Henri J. Dumont Bo-Ping Han The mitochondrial genome of Phyllodiaptomus tunguidus Shen & Tai, 1964 (Copepoda, Calanoida) and its phylogeny Mitochondrial DNA. Part B. Resources freshwater copepod phyllodiaptomus tunguidus mitogenome phylogenetic analysis |
| title | The mitochondrial genome of Phyllodiaptomus tunguidus Shen & Tai, 1964 (Copepoda, Calanoida) and its phylogeny |
| title_full | The mitochondrial genome of Phyllodiaptomus tunguidus Shen & Tai, 1964 (Copepoda, Calanoida) and its phylogeny |
| title_fullStr | The mitochondrial genome of Phyllodiaptomus tunguidus Shen & Tai, 1964 (Copepoda, Calanoida) and its phylogeny |
| title_full_unstemmed | The mitochondrial genome of Phyllodiaptomus tunguidus Shen & Tai, 1964 (Copepoda, Calanoida) and its phylogeny |
| title_short | The mitochondrial genome of Phyllodiaptomus tunguidus Shen & Tai, 1964 (Copepoda, Calanoida) and its phylogeny |
| title_sort | mitochondrial genome of phyllodiaptomus tunguidus shen tai 1964 copepoda calanoida and its phylogeny |
| topic | freshwater copepod phyllodiaptomus tunguidus mitogenome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2020.1763863 |
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