The complete plastome sequence of Clematis guniuensis (Ranunculaceae), a new plant species endemic to China
Clematis guniuensis is a new plant species in China, which distributes in both provinces of Zhejiang and Anhui with extremely small population. The whole chloroplast (CP) genome was assembled by NovoPlasty using high-throughput sequencing data generated by an Illumina Hiseq X Ten platform. The circu...
| Main Authors: | , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1704662 |
| _version_ | 1797639488035356672 |
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| author | Ming Jiang Junfeng Wang Huijuan Zhang |
| author_facet | Ming Jiang Junfeng Wang Huijuan Zhang |
| author_sort | Ming Jiang |
| collection | DOAJ |
| description | Clematis guniuensis is a new plant species in China, which distributes in both provinces of Zhejiang and Anhui with extremely small population. The whole chloroplast (CP) genome was assembled by NovoPlasty using high-throughput sequencing data generated by an Illumina Hiseq X Ten platform. The circular chloroplast genome is 159,682 bp in length, and comprises a large single copy of 79,461 bp, a small single copy of 49,156 bp, and two inverted repeats of 31,064 bp each. The CP genome contains 137 genes, including 89 protein-coding genes, eight rRNA genes, 36 tRNA genes, and four pseudogenes. All the pseudogenes were infA, rpl32, ycf1, and ndhK. Phylogenetic analysis results indicated that C. guniuensis was sister to C. trichotoma, with a support rate of 100%. |
| first_indexed | 2024-03-11T13:18:28Z |
| format | Article |
| id | doaj.art-47523b3f03a0453997f9a8cce9bfd7ad |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:18:28Z |
| publishDate | 2020-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-47523b3f03a0453997f9a8cce9bfd7ad2023-11-03T11:00:19ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-01-015140840910.1080/23802359.2019.17046621704662The complete plastome sequence of Clematis guniuensis (Ranunculaceae), a new plant species endemic to ChinaMing Jiang0Junfeng Wang1Huijuan Zhang2Zhejiang Provincial Key Laboratory of Plant Evolutionary and Conservation, College of Life Science, Taizhou UniversityLishui Institute of ForestryZhejiang Provincial Key Laboratory of Plant Evolutionary and Conservation, College of Life Science, Taizhou UniversityClematis guniuensis is a new plant species in China, which distributes in both provinces of Zhejiang and Anhui with extremely small population. The whole chloroplast (CP) genome was assembled by NovoPlasty using high-throughput sequencing data generated by an Illumina Hiseq X Ten platform. The circular chloroplast genome is 159,682 bp in length, and comprises a large single copy of 79,461 bp, a small single copy of 49,156 bp, and two inverted repeats of 31,064 bp each. The CP genome contains 137 genes, including 89 protein-coding genes, eight rRNA genes, 36 tRNA genes, and four pseudogenes. All the pseudogenes were infA, rpl32, ycf1, and ndhK. Phylogenetic analysis results indicated that C. guniuensis was sister to C. trichotoma, with a support rate of 100%.http://dx.doi.org/10.1080/23802359.2019.1704662clematis guniuensisplastomephylogenetic analysis |
| spellingShingle | Ming Jiang Junfeng Wang Huijuan Zhang The complete plastome sequence of Clematis guniuensis (Ranunculaceae), a new plant species endemic to China Mitochondrial DNA. Part B. Resources clematis guniuensis plastome phylogenetic analysis |
| title | The complete plastome sequence of Clematis guniuensis (Ranunculaceae), a new plant species endemic to China |
| title_full | The complete plastome sequence of Clematis guniuensis (Ranunculaceae), a new plant species endemic to China |
| title_fullStr | The complete plastome sequence of Clematis guniuensis (Ranunculaceae), a new plant species endemic to China |
| title_full_unstemmed | The complete plastome sequence of Clematis guniuensis (Ranunculaceae), a new plant species endemic to China |
| title_short | The complete plastome sequence of Clematis guniuensis (Ranunculaceae), a new plant species endemic to China |
| title_sort | complete plastome sequence of clematis guniuensis ranunculaceae a new plant species endemic to china |
| topic | clematis guniuensis plastome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2019.1704662 |
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