The complete chloroplast genome of Bothriochloa ischaemum
Bothriochloa ischaemum (Linn.) 1936 is a high-quality perennial forage in Loess Plateau of China. In this study, we sequenced and characterized the complete chloroplast genome of B. ischaemum, which was a circular DNA of 138,316 bp in length, including a large single copy (LSC) region of 80,226 bp,...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2022-05-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2022.2073850 |
| _version_ | 1797638633576988672 |
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| author | Yu-ying Li Hong-yu Xu Hua Zhong Zhi-qing Yang Kuan-hu Dong Fang-shan Xia |
| author_facet | Yu-ying Li Hong-yu Xu Hua Zhong Zhi-qing Yang Kuan-hu Dong Fang-shan Xia |
| author_sort | Yu-ying Li |
| collection | DOAJ |
| description | Bothriochloa ischaemum (Linn.) 1936 is a high-quality perennial forage in Loess Plateau of China. In this study, we sequenced and characterized the complete chloroplast genome of B. ischaemum, which was a circular DNA of 138,316 bp in length, including a large single copy (LSC) region of 80,226 bp, a small single copy (SSC) region of 12,526 bp, and the circular DNA was separated by a pair of identical inverted repeat regions (IRs) of 22,782 bp each. A total of 134 genes were identified, including 87 protein-coding genes, 39 tRNA genes, and eight rRNA genes. Phylogenetic tree showed that B. ischaemum was closer to B. decipiens and B. alta, genus Bothriochloa was closely related to genus Pseudanthistiria. Our findings will be helpful for better understanding of genetic diversity of Bothriochloa plants. |
| first_indexed | 2024-03-11T13:05:25Z |
| format | Article |
| id | doaj.art-482c6bae6e0e4c1fb24c4724d04d5c5e |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:05:25Z |
| publishDate | 2022-05-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-482c6bae6e0e4c1fb24c4724d04d5c5e2023-11-03T14:36:03ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592022-05-017584484510.1080/23802359.2022.20738502073850The complete chloroplast genome of Bothriochloa ischaemumYu-ying Li0Hong-yu Xu1Hua Zhong2Zhi-qing Yang3Kuan-hu Dong4Fang-shan Xia5College of Grassland Science, Shanxi Agricultural UniversityCollege of Grassland Science, Shanxi Agricultural UniversityCollege of Grassland Science, Shanxi Agricultural UniversityCollege of Grassland Science, Shanxi Agricultural UniversityCollege of Grassland Science, Shanxi Agricultural UniversityCollege of Grassland Science, Shanxi Agricultural UniversityBothriochloa ischaemum (Linn.) 1936 is a high-quality perennial forage in Loess Plateau of China. In this study, we sequenced and characterized the complete chloroplast genome of B. ischaemum, which was a circular DNA of 138,316 bp in length, including a large single copy (LSC) region of 80,226 bp, a small single copy (SSC) region of 12,526 bp, and the circular DNA was separated by a pair of identical inverted repeat regions (IRs) of 22,782 bp each. A total of 134 genes were identified, including 87 protein-coding genes, 39 tRNA genes, and eight rRNA genes. Phylogenetic tree showed that B. ischaemum was closer to B. decipiens and B. alta, genus Bothriochloa was closely related to genus Pseudanthistiria. Our findings will be helpful for better understanding of genetic diversity of Bothriochloa plants.http://dx.doi.org/10.1080/23802359.2022.2073850bothriochloa ischaemumchloroplast genomephylogenetic analysis |
| spellingShingle | Yu-ying Li Hong-yu Xu Hua Zhong Zhi-qing Yang Kuan-hu Dong Fang-shan Xia The complete chloroplast genome of Bothriochloa ischaemum Mitochondrial DNA. Part B. Resources bothriochloa ischaemum chloroplast genome phylogenetic analysis |
| title | The complete chloroplast genome of Bothriochloa ischaemum |
| title_full | The complete chloroplast genome of Bothriochloa ischaemum |
| title_fullStr | The complete chloroplast genome of Bothriochloa ischaemum |
| title_full_unstemmed | The complete chloroplast genome of Bothriochloa ischaemum |
| title_short | The complete chloroplast genome of Bothriochloa ischaemum |
| title_sort | complete chloroplast genome of bothriochloa ischaemum |
| topic | bothriochloa ischaemum chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2022.2073850 |
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