Sketching and sampling approaches for fast and accurate long read classification

Abstract Background In modern sequencing experiments, quickly and accurately identifying the sources of the reads is a crucial need. In metagenomics, where each read comes from one of potentially many members of a community, it can be important to identify the exact species the read is from. In othe...

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Bibliographic Details
Main Authors: Arun Das, Michael C. Schatz
Format: Article
Language:English
Published: BMC 2022-10-01
Series:BMC Bioinformatics
Subjects:
Online Access:https://doi.org/10.1186/s12859-022-05014-0