Assisted clustering of gene expression data using regulatory data from partially overlapping sets of individuals

Assisted clustering of gene expression data using regulatory data from partially overlapping sets of individuals

Abstract Background As omics measurements profiled on different molecular layers are interconnected, integrative approaches that incorporate the regulatory effect from multi-level omics data are needed. When the multi-level omics data are from the same individuals, gene expression (GE) clusters can...

Volledige beschrijving

Bibliografische gegevens
Hoofdauteurs:	Wenqing Jiang, Roby Joehanes, Daniel Levy, George T O’Connor, Josée Dupuis
Formaat:	Artikel
Taal:	English
Gepubliceerd in:	BMC 2022-12-01
Reeks:	BMC Genomics
Onderwerpen:	Multi-omics data integration Gene expression Clustering DNA methylation Genotype Framingham Heart Study
Online toegang:	https://doi.org/10.1186/s12864-022-09026-1

Gelijkaardige items

Clustering multilayer omics data using MuNCut
door: Sebastian J. Teran Hidalgo, et al.
Gepubliceerd in: (2018-03-01)

Anterior mediastinal masses in the Framingham Heart Study: Prevalence and CT image characteristics
door: Tetsuro Araki, et al.
Gepubliceerd in: (2015-01-01)

PathME: pathway based multi-modal sparse autoencoders for clustering of patient-level multi-omics data
door: Amina Lemsara, et al.
Gepubliceerd in: (2020-04-01)

Partition Quantitative Assessment (PQA): A Quantitative Methodology to Assess the Embedded Noise in Clustered Omics and Systems Biology Data
door: Diego A. Camacho-Hernández, et al.
Gepubliceerd in: (2021-06-01)

Evaluation of Machine Learning Models for Predicting Cardiovascular Disease Based on Framingham Heart Study Data
door: Ruddy J Suhatril, et al.
Gepubliceerd in: (2024-04-01)

Bayesian Multi-View Clustering given complex inter-view structure [version 2; peer review: 2 approved]
door: Benjamin D. Shapiro, et al.
Gepubliceerd in: (2024-02-01)

Combining Partially Overlapping Multi-Omics Data in Databases Using Relationship Matrices
door: Deniz Akdemir, et al.
Gepubliceerd in: (2020-07-01)

Multiview clustering of multi-omics data integration by using a penalty model
door: Hamas A. AL-kuhali, et al.
Gepubliceerd in: (2022-07-01)

Family History of Modifiable Risk Factors and Association With Future Cardiovascular Disease
door: Christy N. Taylor, et al.
Gepubliceerd in: (2023-03-01)

Periodontal health status and its association with cardiovascular risk score among the rural community in India: A community-based study
door: Shankar Radhakrishnan, et al.
Gepubliceerd in: (2023-01-01)

Single nucleus multi-omics identifies human cortical cell regulatory genome diversity
door: Chongyuan Luo, et al.
Gepubliceerd in: (2022-03-01)

William Kannel y el estudio Framingham
door: Eduardo Álvarez Acevedo
Gepubliceerd in: (2022-04-01)

William Kannel and the Framingham Study
door: Eduardo Álvarez Acevedo
Gepubliceerd in: (2022-04-01)

Assessing a change for acute myocardial infraction and its risk factors in a rural cohort of northern state of India
door: D Kumar, et al.
Gepubliceerd in: (2017-01-01)

SpatialLeiden: spatially aware Leiden clustering
door: Niklas Müller-Bötticher, et al.
Gepubliceerd in: (2025-02-01)

FOCT: Fast Overlapping Clustering for Textual Data
door: Atefeh Khazaei, et al.
Gepubliceerd in: (2021-01-01)

Using recursive feature elimination in random forest to account for correlated variables in high dimensional data
door: Burcu F. Darst, et al.
Gepubliceerd in: (2018-09-01)

Fast tree aggregation for consensus hierarchical clustering
door: Audrey Hulot, et al.
Gepubliceerd in: (2020-03-01)

Identifying chronic obstructive pulmonary disease from integrative omics and clustering in lung tissue
door: Brian D Hobbs, et al.
Gepubliceerd in: (2023-04-01)

Escala Framingham y recomendaciones eular como índices de evaluación de riesgo cardiovascular en pacientes con artritis reumatoidea
door: Diego Bratta Castro, et al.
Gepubliceerd in: (2024-04-01)

Ten-year risk of cardiovascular events among the adult population of West Tripura District of India by the Framingham risk score: A cross-sectional study
door: Ashit Kumar Paul, et al.
Gepubliceerd in: (2024-06-01)

IJCM_170A: Exploring 10-year cardiovascular risk assessment through the utilization of the Framingham Risk Score(FRS): A Cross-Sectional Study
door: Saini Mohit, et al.
Gepubliceerd in: (2024-04-01)

Changes in coronary heart disease risk profiles of HIV patients in Zimbabwe over 9 months: a follow-up study
door: Zhou DT, et al.
Gepubliceerd in: (2016-10-01)

The Joint Analysis of Multi-Omics Data Revealed the Methylation-Expression Regulations in Atrial Fibrillation
door: Ban Liu, et al.
Gepubliceerd in: (2020-03-01)

IOAT: an interactive tool for statistical analysis of omics data and clinical data
door: Lanlan Wu, et al.
Gepubliceerd in: (2021-06-01)

Multistate Outbreak of MDR TB Identified by Genotype Cluster Investigation
door: Pennan M. Barry, et al.
Gepubliceerd in: (2012-01-01)

Interactive visual exploration and refinement of cluster assignments
door: Michael Kern, et al.
Gepubliceerd in: (2017-09-01)

Visual analysis of multi-omics data
door: Austin Swart, et al.
Gepubliceerd in: (2024-09-01)

DNA methylation biomarkers and myopia: a multi-omics study integrating GWAS, mQTL and eQTL data
door: Xing-Xuan Dong, et al.
Gepubliceerd in: (2024-11-01)

AutoSCAN: automatic detection of DBSCAN parameters and efficient clustering of data in overlapping density regions
door: Adil Abdu Bushra, et al.
Gepubliceerd in: (2024-03-01)

Investigation of the Relationship of Sociodemographic and Clinical Characteristics with Cardiovascular Risk Scores in Patients with Schizophrenia Living in Nursing Homes
door: Hatice Kaya, et al.
Gepubliceerd in: (2023-03-01)

The Framingham Heart Study: Populational CT-based phenotyping in the lungs and mediastinum
door: Tetsuro Araki, et al.
Gepubliceerd in: (2020-01-01)

High-throughput digitization of analog human echocardiography data
door: Alan C. Kwan, et al.
Gepubliceerd in: (2020-01-01)

Riesgo cardiovascular según tablas de la OMS, el estudio Framingham y la razón apolipoproteína B/apolipoproteína A1 Cardiovascular risk according the OMS tables, the Framingham study and the B apolipoprotein/A1 apolipoprotein reason
door: Ivette Castillo Arocha, et al.
Gepubliceerd in: (2010-12-01)

Assessment Of Cardiovascular Disease Risk by Using Framingham Risk Equation Amongst the Residents of Ahmedabad City
door: Sonal Parikh, et al.
Gepubliceerd in: (2013-09-01)

Risks of Incident Cardiovascular Disease Associated With Concomitant Elevations in Lipoprotein(a) and Low‐Density Lipoprotein Cholesterol—The Framingham Heart Study
door: Mehdi Afshar, et al.
Gepubliceerd in: (2020-09-01)

Editorial: Women in lipid and fatty acid research: 2022
door: Vincenza Cifarelli, et al.
Gepubliceerd in: (2023-09-01)

Ten‐Year Cardiovascular Disease Risk Score and Cognitive Function Among Older Adults: The National Health and Nutrition Examination Survey 2011 to 2014
door: Jingkai Wei, et al.
Gepubliceerd in: (2023-06-01)

Impact of modifiable risk factors on prediction of 10-year cardiovascular disease utilizing framingham risk score in Southwest Iran
door: Nader Saki, et al.
Gepubliceerd in: (2023-07-01)

Prevalence of risk factors and estimation of 10-year risk for cardiovascular diseases among male adult population of Tamil Nadu India-an insight from the National Family Health Survey–5
door: Midhun Sasikumar, et al.
Gepubliceerd in: (2023-07-01)