Complete plastid genome sequence of Neolitsea aciculata (Laurales: Lauraceae), an evergreen broad-leaved tree endemic to East Asia
In this study, we sequenced the complete plastid genome (plastome) of Neolitsea aciculata, an evergreen broad-leaved tree endemic to East Asia, a woody component of East Asian warm-temperate and subtropical forests across China, Korea, and Japan. The plastome of N. aciculata is assembled as a single...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-09-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1959457 |
| _version_ | 1797638778196590592 |
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| author | Eun-Kyeong Han Gantsetseg Amarsanaa Jung-Hyun Kim Soonku So In-Su Choi Jung-Hyun Lee |
| author_facet | Eun-Kyeong Han Gantsetseg Amarsanaa Jung-Hyun Kim Soonku So In-Su Choi Jung-Hyun Lee |
| author_sort | Eun-Kyeong Han |
| collection | DOAJ |
| description | In this study, we sequenced the complete plastid genome (plastome) of Neolitsea aciculata, an evergreen broad-leaved tree endemic to East Asia, a woody component of East Asian warm-temperate and subtropical forests across China, Korea, and Japan. The plastome of N. aciculata is assembled as a single contig (152,722 bp). A large and a small single copy (93,785 and 18,795 bp, respectively) of the genome are separated by a pair of inverted repeats (20,071 bp). The genome consists of 126 genes, including 80 protein-coding, eight ribosomal RNA, and 36 transfer RNA genes. Two genes in the IR region (ycf1 and ycf2) are pseudogenized. Our phylogenetic analysis revealed the phylogenetic position of N. aciculata in a highly supported clade of the genus Neolitsea along with other two congeners, N. pallens and N. sericea. |
| first_indexed | 2024-03-11T13:08:27Z |
| format | Article |
| id | doaj.art-48eb1720064841a681235d6d43737e3a |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:08:27Z |
| publishDate | 2021-09-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-48eb1720064841a681235d6d43737e3a2023-11-03T14:28:29ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-09-01692553255510.1080/23802359.2021.19594571959457Complete plastid genome sequence of Neolitsea aciculata (Laurales: Lauraceae), an evergreen broad-leaved tree endemic to East AsiaEun-Kyeong Han0Gantsetseg Amarsanaa1Jung-Hyun Kim2Soonku So3In-Su Choi4Jung-Hyun Lee5Department of Biological Sciences and Biotechnology, Chonnam National UniversityDepartment of Biology Education, Chonnam National UniversityPlant Resources Division, National Institute of Biological ResourcesEcosystem Research Division, Korea National Park Research InstituteSchool of Life Sciences, Arizona State UniversityDepartment of Biology Education, Chonnam National UniversityIn this study, we sequenced the complete plastid genome (plastome) of Neolitsea aciculata, an evergreen broad-leaved tree endemic to East Asia, a woody component of East Asian warm-temperate and subtropical forests across China, Korea, and Japan. The plastome of N. aciculata is assembled as a single contig (152,722 bp). A large and a small single copy (93,785 and 18,795 bp, respectively) of the genome are separated by a pair of inverted repeats (20,071 bp). The genome consists of 126 genes, including 80 protein-coding, eight ribosomal RNA, and 36 transfer RNA genes. Two genes in the IR region (ycf1 and ycf2) are pseudogenized. Our phylogenetic analysis revealed the phylogenetic position of N. aciculata in a highly supported clade of the genus Neolitsea along with other two congeners, N. pallens and N. sericea.http://dx.doi.org/10.1080/23802359.2021.1959457chloroplastlauraceaeneolitsea aciculataphylogenetic analysispseudogene |
| spellingShingle | Eun-Kyeong Han Gantsetseg Amarsanaa Jung-Hyun Kim Soonku So In-Su Choi Jung-Hyun Lee Complete plastid genome sequence of Neolitsea aciculata (Laurales: Lauraceae), an evergreen broad-leaved tree endemic to East Asia Mitochondrial DNA. Part B. Resources chloroplast lauraceae neolitsea aciculata phylogenetic analysis pseudogene |
| title | Complete plastid genome sequence of Neolitsea aciculata (Laurales: Lauraceae), an evergreen broad-leaved tree endemic to East Asia |
| title_full | Complete plastid genome sequence of Neolitsea aciculata (Laurales: Lauraceae), an evergreen broad-leaved tree endemic to East Asia |
| title_fullStr | Complete plastid genome sequence of Neolitsea aciculata (Laurales: Lauraceae), an evergreen broad-leaved tree endemic to East Asia |
| title_full_unstemmed | Complete plastid genome sequence of Neolitsea aciculata (Laurales: Lauraceae), an evergreen broad-leaved tree endemic to East Asia |
| title_short | Complete plastid genome sequence of Neolitsea aciculata (Laurales: Lauraceae), an evergreen broad-leaved tree endemic to East Asia |
| title_sort | complete plastid genome sequence of neolitsea aciculata laurales lauraceae an evergreen broad leaved tree endemic to east asia |
| topic | chloroplast lauraceae neolitsea aciculata phylogenetic analysis pseudogene |
| url | http://dx.doi.org/10.1080/23802359.2021.1959457 |
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