Mask and Release Strategy‐Enabled Diversity‐Oriented Synthesis for DNA‐Encoded Library

Abstract An ideal DNA‐encoded library (DEL) selection requires the library to consist of diverse core skeletons and cover chemical space as much as possible. However, the lack of efficient on‐DNA synthetic approaches toward core skeletons has greatly restricted the diversity of DEL. To mitigate this...

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Main Authors: Silin Zhang, Haiman Zhang, Xiawen Liu, Ping Qi, Tingting Tan, Shengdong Wang, Hui Gao, Hongtao Xu, Zhi Zhou, Wei Yi
Format: Article
Language:English
Published: Wiley 2024-02-01
Series:Advanced Science
Subjects:
Online Access:https://doi.org/10.1002/advs.202307049
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author Silin Zhang
Haiman Zhang
Xiawen Liu
Ping Qi
Tingting Tan
Shengdong Wang
Hui Gao
Hongtao Xu
Zhi Zhou
Wei Yi
author_facet Silin Zhang
Haiman Zhang
Xiawen Liu
Ping Qi
Tingting Tan
Shengdong Wang
Hui Gao
Hongtao Xu
Zhi Zhou
Wei Yi
author_sort Silin Zhang
collection DOAJ
description Abstract An ideal DNA‐encoded library (DEL) selection requires the library to consist of diverse core skeletons and cover chemical space as much as possible. However, the lack of efficient on‐DNA synthetic approaches toward core skeletons has greatly restricted the diversity of DEL. To mitigate this issue, this work disclosed a “Mask & Release” strategy to streamline the challenging on‐DNA core skeleton synthesis. N‐phenoxyacetamide is used as a masked phenol and versatile directing group to mediate diversified DNA‐compatible C‐H functionalization, introducing the 1st‐dimensional diversity at a defined site, and simultaneously releasing the phenol functionality, which can facilitate the introduction of the 2nd diversity. This work not only provides a set of efficient syntheses toward DNA‐conjugated drug‐like core skeletons such as ortho‐alkenyl/sulfiliminyl/cyclopropyl phenol, benzofuran, dihydrobenzofuran but also provides a paradigm for on‐DNA core skeleton synthetic method development.
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spelling doaj.art-490be418e5814172b1cfb3e3096561f72024-02-09T08:26:35ZengWileyAdvanced Science2198-38442024-02-01116n/an/a10.1002/advs.202307049Mask and Release Strategy‐Enabled Diversity‐Oriented Synthesis for DNA‐Encoded LibrarySilin Zhang0Haiman Zhang1Xiawen Liu2Ping Qi3Tingting Tan4Shengdong Wang5Hui Gao6Hongtao Xu7Zhi Zhou8Wei Yi9Guangzhou Municipal and Guangdong Provincial Key Laboratory of Molecular Target & Clinical Pharmacology The NMPA and State Key Laboratory of Respiratory Disease School of Pharmaceutical Sciences and the Fifth Affiliated Hospital Guangzhou Medical University Guangzhou 511436 ChinaGuangzhou Municipal and Guangdong Provincial Key Laboratory of Molecular Target & Clinical Pharmacology The NMPA and State Key Laboratory of Respiratory Disease School of Pharmaceutical Sciences and the Fifth Affiliated Hospital Guangzhou Medical University Guangzhou 511436 ChinaGuangzhou Municipal and Guangdong Provincial Key Laboratory of Molecular Target & Clinical Pharmacology The NMPA and State Key Laboratory of Respiratory Disease School of Pharmaceutical Sciences and the Fifth Affiliated Hospital Guangzhou Medical University Guangzhou 511436 ChinaGuangzhou Institute for Food Inspection Guangzhou 511400 ChinaShanghai Institute for Advanced Immunochemical Studies & School of Life Science and Technology ShanghaiTech University Shanghai 201210 ChinaGuangzhou Municipal and Guangdong Provincial Key Laboratory of Molecular Target & Clinical Pharmacology The NMPA and State Key Laboratory of Respiratory Disease School of Pharmaceutical Sciences and the Fifth Affiliated Hospital Guangzhou Medical University Guangzhou 511436 ChinaGuangzhou Municipal and Guangdong Provincial Key Laboratory of Molecular Target & Clinical Pharmacology The NMPA and State Key Laboratory of Respiratory Disease School of Pharmaceutical Sciences and the Fifth Affiliated Hospital Guangzhou Medical University Guangzhou 511436 ChinaShanghai Institute for Advanced Immunochemical Studies & School of Life Science and Technology ShanghaiTech University Shanghai 201210 ChinaGuangzhou Municipal and Guangdong Provincial Key Laboratory of Molecular Target & Clinical Pharmacology The NMPA and State Key Laboratory of Respiratory Disease School of Pharmaceutical Sciences and the Fifth Affiliated Hospital Guangzhou Medical University Guangzhou 511436 ChinaGuangzhou Municipal and Guangdong Provincial Key Laboratory of Molecular Target & Clinical Pharmacology The NMPA and State Key Laboratory of Respiratory Disease School of Pharmaceutical Sciences and the Fifth Affiliated Hospital Guangzhou Medical University Guangzhou 511436 ChinaAbstract An ideal DNA‐encoded library (DEL) selection requires the library to consist of diverse core skeletons and cover chemical space as much as possible. However, the lack of efficient on‐DNA synthetic approaches toward core skeletons has greatly restricted the diversity of DEL. To mitigate this issue, this work disclosed a “Mask & Release” strategy to streamline the challenging on‐DNA core skeleton synthesis. N‐phenoxyacetamide is used as a masked phenol and versatile directing group to mediate diversified DNA‐compatible C‐H functionalization, introducing the 1st‐dimensional diversity at a defined site, and simultaneously releasing the phenol functionality, which can facilitate the introduction of the 2nd diversity. This work not only provides a set of efficient syntheses toward DNA‐conjugated drug‐like core skeletons such as ortho‐alkenyl/sulfiliminyl/cyclopropyl phenol, benzofuran, dihydrobenzofuran but also provides a paradigm for on‐DNA core skeleton synthetic method development.https://doi.org/10.1002/advs.202307049benzofurandiversity‐oriented synthesisDNA‐encoded librarymask and releasesulfiliminyl phenol
spellingShingle Silin Zhang
Haiman Zhang
Xiawen Liu
Ping Qi
Tingting Tan
Shengdong Wang
Hui Gao
Hongtao Xu
Zhi Zhou
Wei Yi
Mask and Release Strategy‐Enabled Diversity‐Oriented Synthesis for DNA‐Encoded Library
Advanced Science
benzofuran
diversity‐oriented synthesis
DNA‐encoded library
mask and release
sulfiliminyl phenol
title Mask and Release Strategy‐Enabled Diversity‐Oriented Synthesis for DNA‐Encoded Library
title_full Mask and Release Strategy‐Enabled Diversity‐Oriented Synthesis for DNA‐Encoded Library
title_fullStr Mask and Release Strategy‐Enabled Diversity‐Oriented Synthesis for DNA‐Encoded Library
title_full_unstemmed Mask and Release Strategy‐Enabled Diversity‐Oriented Synthesis for DNA‐Encoded Library
title_short Mask and Release Strategy‐Enabled Diversity‐Oriented Synthesis for DNA‐Encoded Library
title_sort mask and release strategy enabled diversity oriented synthesis for dna encoded library
topic benzofuran
diversity‐oriented synthesis
DNA‐encoded library
mask and release
sulfiliminyl phenol
url https://doi.org/10.1002/advs.202307049
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