DeepSuccinylSite: a deep learning based approach for protein succinylation site prediction

DeepSuccinylSite: a deep learning based approach for protein succinylation site prediction

Abstract Background Protein succinylation has recently emerged as an important and common post-translation modification (PTM) that occurs on lysine residues. Succinylation is notable both in its size (e.g., at 100 Da, it is one of the larger chemical PTMs) and in its ability to modify the net charge...

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Bibliographic Details
Main Authors: Niraj Thapa, Meenal Chaudhari, Sean McManus, Kaushik Roy, Robert H. Newman, Hiroto Saigo, Dukka B. KC
Format: Article
Language:English
Published: BMC 2020-04-01
Series:BMC Bioinformatics
Subjects:
Succinylation
Deep learning
Convolutional neural network
Recurrent neural network
Long short-term memory
Embedding
Online Access:http://link.springer.com/article/10.1186/s12859-020-3342-z

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