Mitochondrial haplotype distribution and phylogenetic relationship of an endangered species Reeve's turtle (Mauremys reevesii) in East Asia
This study was examined to reveal haplotype distribution and phylogenetic relationship using mitochondrial DNA CYTB gene sequences of Reeve’s turtle (Mauremys reevesii) of East Asia. CYTB sequences of Reeve’s turtles were divided into 6 haplotypes (Hap01–Hap06). Chinese turtles were found in Hap01,...
| Main Authors: | , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Elsevier
2017-03-01
|
| Series: | Journal of Asia-Pacific Biodiversity |
| Subjects: | |
| Online Access: | http://www.sciencedirect.com/science/article/pii/S2287884X17300092 |
| _version_ | 1818349105705910272 |
|---|---|
| author | Hong-Shik Oh Seon-Mi Park Sang-Hyun Han |
| author_facet | Hong-Shik Oh Seon-Mi Park Sang-Hyun Han |
| author_sort | Hong-Shik Oh |
| collection | DOAJ |
| description | This study was examined to reveal haplotype distribution and phylogenetic relationship using mitochondrial DNA CYTB gene sequences of Reeve’s turtle (Mauremys reevesii) of East Asia. CYTB sequences of Reeve’s turtles were divided into 6 haplotypes (Hap01–Hap06). Chinese turtles were found in Hap01, Hap02, Hap04, and Hap05, and Hap01 was the highest frequency of 85.0%. Korean Turtles were found in Hap01, Hap03, Hap04, and Hap05, and Hap03 was the highest frequency of 52.1%. Although there was no haplotype which includes only the CYTB sequence exclusive for Reeve’s turtles of Korea, since no CYTB sequence of China was found in Hap03, it would be possible that Hap03 turtles of Korea are separated from those of China. The haplotypes of Reeve’s turtles of East Asia were monophyletic, which indicated that they had been evolved from a single maternal lineage, but went through local evolution after geographical migration and isolation in East Asia. |
| first_indexed | 2024-12-13T18:00:40Z |
| format | Article |
| id | doaj.art-4a3067707d9545299be7df7a3ec73c1e |
| institution | Directory Open Access Journal |
| issn | 2287-884X |
| language | English |
| last_indexed | 2024-12-13T18:00:40Z |
| publishDate | 2017-03-01 |
| publisher | Elsevier |
| record_format | Article |
| series | Journal of Asia-Pacific Biodiversity |
| spelling | doaj.art-4a3067707d9545299be7df7a3ec73c1e2022-12-21T23:36:12ZengElsevierJournal of Asia-Pacific Biodiversity2287-884X2017-03-01101273110.1016/j.japb.2016.12.003Mitochondrial haplotype distribution and phylogenetic relationship of an endangered species Reeve's turtle (Mauremys reevesii) in East AsiaHong-Shik Oh0Seon-Mi Park1Sang-Hyun Han2Faculty of Science Education, Jeju National University, Jeju, South KoreaFaculty of Science Education, Jeju National University, Jeju, South KoreaEducational Science Research Institute, Jeju National University, Jeju, South KoreaThis study was examined to reveal haplotype distribution and phylogenetic relationship using mitochondrial DNA CYTB gene sequences of Reeve’s turtle (Mauremys reevesii) of East Asia. CYTB sequences of Reeve’s turtles were divided into 6 haplotypes (Hap01–Hap06). Chinese turtles were found in Hap01, Hap02, Hap04, and Hap05, and Hap01 was the highest frequency of 85.0%. Korean Turtles were found in Hap01, Hap03, Hap04, and Hap05, and Hap03 was the highest frequency of 52.1%. Although there was no haplotype which includes only the CYTB sequence exclusive for Reeve’s turtles of Korea, since no CYTB sequence of China was found in Hap03, it would be possible that Hap03 turtles of Korea are separated from those of China. The haplotypes of Reeve’s turtles of East Asia were monophyletic, which indicated that they had been evolved from a single maternal lineage, but went through local evolution after geographical migration and isolation in East Asia.http://www.sciencedirect.com/science/article/pii/S2287884X17300092cytochrome bgeographical migrationhaplotypematernal ancestorReeve's Turtle |
| spellingShingle | Hong-Shik Oh Seon-Mi Park Sang-Hyun Han Mitochondrial haplotype distribution and phylogenetic relationship of an endangered species Reeve's turtle (Mauremys reevesii) in East Asia Journal of Asia-Pacific Biodiversity cytochrome b geographical migration haplotype maternal ancestor Reeve's Turtle |
| title | Mitochondrial haplotype distribution and phylogenetic relationship of an endangered species Reeve's turtle (Mauremys reevesii) in East Asia |
| title_full | Mitochondrial haplotype distribution and phylogenetic relationship of an endangered species Reeve's turtle (Mauremys reevesii) in East Asia |
| title_fullStr | Mitochondrial haplotype distribution and phylogenetic relationship of an endangered species Reeve's turtle (Mauremys reevesii) in East Asia |
| title_full_unstemmed | Mitochondrial haplotype distribution and phylogenetic relationship of an endangered species Reeve's turtle (Mauremys reevesii) in East Asia |
| title_short | Mitochondrial haplotype distribution and phylogenetic relationship of an endangered species Reeve's turtle (Mauremys reevesii) in East Asia |
| title_sort | mitochondrial haplotype distribution and phylogenetic relationship of an endangered species reeve s turtle mauremys reevesii in east asia |
| topic | cytochrome b geographical migration haplotype maternal ancestor Reeve's Turtle |
| url | http://www.sciencedirect.com/science/article/pii/S2287884X17300092 |
| work_keys_str_mv | AT hongshikoh mitochondrialhaplotypedistributionandphylogeneticrelationshipofanendangeredspeciesreevesturtlemauremysreevesiiineastasia AT seonmipark mitochondrialhaplotypedistributionandphylogeneticrelationshipofanendangeredspeciesreevesturtlemauremysreevesiiineastasia AT sanghyunhan mitochondrialhaplotypedistributionandphylogeneticrelationshipofanendangeredspeciesreevesturtlemauremysreevesiiineastasia |