A roadmap for the generation of benchmarking resources for antimicrobial resistance detection using next generation sequencing [version 2; peer review: 1 approved, 2 approved with reservations]

A roadmap for the generation of benchmarking resources for antimicrobial resistance detection using next generation sequencing [version 2; peer review: 1 approved, 2 approved with reservations]

Next Generation Sequencing technologies significantly impact the field of Antimicrobial Resistance (AMR) detection and monitoring, with immediate uses in diagnosis and risk assessment. For this application and in general, considerable challenges remain in demonstrating sufficient trust to act upon t...

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Bibliographic Details
Main Authors: Alison E. Mather, Alice Carolyn McHardy, Ivo Gut, Gemma L. Kay, Kevin Vanneste, Arthur Pightling, John Rossen, Thierry Naas, Silke Peter, Henrik Westh, Alexandre Angers-Loustau, Etienne Ruppé, Robert Schlaberg, Marco Fabbri, Alessandro Cestaro, Maddalena Querci, Barbara Raffael, Mauro Petrillo, Paul Hammer, Lukas M. Weber, Jean-Yves Madec, Valentina Paracchini, Guy Van den Eede, Erik Alm, Derya Aytan-Aktug, Dafni Maria Kagkli, Teresa Coque, Kok-Gan Chan, Christoph Endrullat, Salvador Capella-Gutierrez, Catherine Carrillo
Format: Article
Language:English
Published: F1000 Research Ltd 2022-03-01
Series:F1000Research
Subjects:
Antimicrobial resistance
bioinformatics
next-generation sequencing
benchmarking
eng
Online Access:https://f1000research.com/articles/10-80/v2

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