Enhancing coevolutionary signals in protein–protein interaction prediction through clade-wise alignment integration

Abstract Protein–protein interactions (PPIs) play essential roles in most biological processes. The binding interfaces between interacting proteins impose evolutionary constraints that have successfully been employed to predict PPIs from multiple sequence alignments (MSAs). To construct MSAs, critic...

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Bibliographic Details
Main Authors: Tao Fang, Damian Szklarczyk, Radja Hachilif, Christian von Mering
Format: Article
Language:English
Published: Nature Portfolio 2024-03-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-024-55655-9

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