The complete chloroplast genome of Castanea sativa Mill. (Fagaceae)
Castanea sativa Mill. is mainly grown in the temperate regions of continental Europe, and it has a considerable economic value. In this study, the complete chloroplast genome sequence of Castanea sativa was characterized. Leaves were collected from the National Botanical Garden of Latvia. The chloro...
| Main Authors: | , , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-03-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1903359 |
| _version_ | 1797638928442851328 |
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| author | Cancan Zhu Shijie Zhang Xiaoqian Bai Fuqin Guan Yu Chen Yuqiang Zhao Mimi Li |
| author_facet | Cancan Zhu Shijie Zhang Xiaoqian Bai Fuqin Guan Yu Chen Yuqiang Zhao Mimi Li |
| author_sort | Cancan Zhu |
| collection | DOAJ |
| description | Castanea sativa Mill. is mainly grown in the temperate regions of continental Europe, and it has a considerable economic value. In this study, the complete chloroplast genome sequence of Castanea sativa was characterized. Leaves were collected from the National Botanical Garden of Latvia. The chloroplast genome was determined to be 160,938 bp in length. It contained large single-copy (LSC) and small single-copy (SSC) regions of 90,519 and 18,967 bp, respectively, which were separated by a pair of 25,726 bp inverted repeat (IR) regions. The genome is predicted to contain 130 genes, including 83 protein-coding genes, 37 tRNA genes, eight rRNA genes, and two pseudo genes. The overall GC content of the genome is 36.8%. A phylogenetic tree reconstructed by 34 chloroplast genomes reveals that C. sativa is most closely related to the clade including C. henryi, C. seguinii and C. mollissima. |
| first_indexed | 2024-03-11T13:09:32Z |
| format | Article |
| id | doaj.art-4ae3680f8cc14e9ca248ed0bbac808f9 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:09:32Z |
| publishDate | 2021-03-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-4ae3680f8cc14e9ca248ed0bbac808f92023-11-03T14:16:08ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-03-01631249125010.1080/23802359.2021.19033591903359The complete chloroplast genome of Castanea sativa Mill. (Fagaceae)Cancan Zhu0Shijie Zhang1Xiaoqian Bai2Fuqin Guan3Yu Chen4Yuqiang Zhao5Mimi Li6Institute of Botany, Jiangsu Province and Chinese Academy of SciencesInstitute of Botany, Jiangsu Province and Chinese Academy of SciencesInstitute of Botany, Jiangsu Province and Chinese Academy of SciencesInstitute of Botany, Jiangsu Province and Chinese Academy of SciencesInstitute of Botany, Jiangsu Province and Chinese Academy of SciencesInstitute of Botany, Jiangsu Province and Chinese Academy of SciencesInstitute of Botany, Jiangsu Province and Chinese Academy of SciencesCastanea sativa Mill. is mainly grown in the temperate regions of continental Europe, and it has a considerable economic value. In this study, the complete chloroplast genome sequence of Castanea sativa was characterized. Leaves were collected from the National Botanical Garden of Latvia. The chloroplast genome was determined to be 160,938 bp in length. It contained large single-copy (LSC) and small single-copy (SSC) regions of 90,519 and 18,967 bp, respectively, which were separated by a pair of 25,726 bp inverted repeat (IR) regions. The genome is predicted to contain 130 genes, including 83 protein-coding genes, 37 tRNA genes, eight rRNA genes, and two pseudo genes. The overall GC content of the genome is 36.8%. A phylogenetic tree reconstructed by 34 chloroplast genomes reveals that C. sativa is most closely related to the clade including C. henryi, C. seguinii and C. mollissima.http://dx.doi.org/10.1080/23802359.2021.1903359castanea sativacomplete chloroplast genomephylogenetic analysis |
| spellingShingle | Cancan Zhu Shijie Zhang Xiaoqian Bai Fuqin Guan Yu Chen Yuqiang Zhao Mimi Li The complete chloroplast genome of Castanea sativa Mill. (Fagaceae) Mitochondrial DNA. Part B. Resources castanea sativa complete chloroplast genome phylogenetic analysis |
| title | The complete chloroplast genome of Castanea sativa Mill. (Fagaceae) |
| title_full | The complete chloroplast genome of Castanea sativa Mill. (Fagaceae) |
| title_fullStr | The complete chloroplast genome of Castanea sativa Mill. (Fagaceae) |
| title_full_unstemmed | The complete chloroplast genome of Castanea sativa Mill. (Fagaceae) |
| title_short | The complete chloroplast genome of Castanea sativa Mill. (Fagaceae) |
| title_sort | complete chloroplast genome of castanea sativa mill fagaceae |
| topic | castanea sativa complete chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2021.1903359 |
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