Genome-Wide Association Analysis Identifies Important Haplotypes and Candidate Gene <i>XKR4</i> for Body Size Traits in Pekin Ducks

Body size is an important growth indicator in ducks and is a primary selection criterion for physical improvement. An excessively rapid growth rate in meat ducks can result in excessive body size, which may hinder subsequent processing and slaughter operations. However, only a few molecular markers...

Полное описание

Библиографические подробности
Главные авторы: Jiang-Zhou Yu, Jun Zhou, Fang-Xi Yang, Jin-Ping Hao, Zhuo-Cheng Hou, Feng Zhu
Формат: Статья
Язык:English
Опубликовано: MDPI AG 2024-08-01
Серии:Animals
Предметы:
Online-ссылка:https://www.mdpi.com/2076-2615/14/16/2349
Описание
Итог:Body size is an important growth indicator in ducks and is a primary selection criterion for physical improvement. An excessively rapid growth rate in meat ducks can result in excessive body size, which may hinder subsequent processing and slaughter operations. However, only a few molecular markers related to body size have been studied in meat ducks. In this study, we performed a genome-wide association study (GWAS) to identify candidate genes and QTLs affecting body length (BL), keel bone length (KBL), neck length (NL), and breast width (BrW) in Pekin ducks (Anas platyrhynchos domestica). Our results indicate the significant SNP for NL is located within a pseudogene, whereas the significant SNP for BrW is located in an intergenic region. More importantly, our analysis identified a haplotype that was significantly associated with both BL and KBL. This haplotype, containing 48 single-nucleotide polymorphisms (SNPs), is localized within the <i>XKR4</i> gene. The identification of this haplotype suggests that <i>XKR4</i> may be a key candidate gene influencing BL and KBL in Pekin ducks. These findings have important implications for the breeding and genetic improvement of Pekin ducks, and provide valuable insights into the genetic architecture of body size traits in this species.
ISSN:2076-2615