Complete mitochondrial genomes of Papilio nephelus chaon and Papilio epycides (Lepidoptera: Papilionidae: Papilioninae) and phylogenetic analysis
The complete mitochondrial genome (mitogenome) sequences of Papilio nephelus chaon and Papilio epycides were sequenced by Illumina and analyzed in this study. They are 15,287 bp and 15,012 bp in size, respectively, and contains 13 protein-coding genes (PCGs), 22 tRNA genes (tRNAs), 2 rRNA genes (rRN...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2022-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2022.2091491 |
| _version_ | 1827772155016773632 |
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| author | Zhentian Yan Mingjuan Lu Site Luo Shulin He Wenbo Fu Xueqian Wang Zhenhuai Fan Danlan Hu Bin Chen |
| author_facet | Zhentian Yan Mingjuan Lu Site Luo Shulin He Wenbo Fu Xueqian Wang Zhenhuai Fan Danlan Hu Bin Chen |
| author_sort | Zhentian Yan |
| collection | DOAJ |
| description | The complete mitochondrial genome (mitogenome) sequences of Papilio nephelus chaon and Papilio epycides were sequenced by Illumina and analyzed in this study. They are 15,287 bp and 15,012 bp in size, respectively, and contains 13 protein-coding genes (PCGs), 22 tRNA genes (tRNAs), 2 rRNA genes (rRNAs), and 1 AT-rich control region (CR). The phylogenetic relationships of 56 species in the Papilionidae were inferred based on concatenated nucleotide sequences by using Maximum Likelihood with the selected best-fit model GTR + F+R6. The phylogenetic analysis showed that P. nephelus chaon and P. epycides were located in the genus Papilio. This study provides a basis for further study on mitogenome and phylogenetics of the Papilionidae. |
| first_indexed | 2024-03-11T13:05:26Z |
| format | Article |
| id | doaj.art-4baa5a0b32d141e8a5b56ee9dd0fd627 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:05:26Z |
| publishDate | 2022-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-4baa5a0b32d141e8a5b56ee9dd0fd6272023-11-03T14:36:05ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592022-07-01771203120510.1080/23802359.2022.20914912091491Complete mitochondrial genomes of Papilio nephelus chaon and Papilio epycides (Lepidoptera: Papilionidae: Papilioninae) and phylogenetic analysisZhentian Yan0Mingjuan Lu1Site Luo2Shulin He3Wenbo Fu4Xueqian Wang5Zhenhuai Fan6Danlan Hu7Bin Chen8Chongqing Key Laboratory of Vector Insects; Institute of Entomology and Molecular Biology, Chongqing Normal UniversityChongqing Key Laboratory of Vector Insects; Institute of Entomology and Molecular Biology, Chongqing Normal UniversitySchool of Life Sciences, Xiamen UniversityChongqing Key Laboratory of Vector Insects; Institute of Entomology and Molecular Biology, Chongqing Normal UniversityChongqing Key Laboratory of Vector Insects; Institute of Entomology and Molecular Biology, Chongqing Normal UniversityChongqing Key Laboratory of Vector Insects; Institute of Entomology and Molecular Biology, Chongqing Normal UniversityChongqing Key Laboratory of Vector Insects; Institute of Entomology and Molecular Biology, Chongqing Normal UniversityChongqing Key Laboratory of Vector Insects; Institute of Entomology and Molecular Biology, Chongqing Normal UniversityChongqing Key Laboratory of Vector Insects; Institute of Entomology and Molecular Biology, Chongqing Normal UniversityThe complete mitochondrial genome (mitogenome) sequences of Papilio nephelus chaon and Papilio epycides were sequenced by Illumina and analyzed in this study. They are 15,287 bp and 15,012 bp in size, respectively, and contains 13 protein-coding genes (PCGs), 22 tRNA genes (tRNAs), 2 rRNA genes (rRNAs), and 1 AT-rich control region (CR). The phylogenetic relationships of 56 species in the Papilionidae were inferred based on concatenated nucleotide sequences by using Maximum Likelihood with the selected best-fit model GTR + F+R6. The phylogenetic analysis showed that P. nephelus chaon and P. epycides were located in the genus Papilio. This study provides a basis for further study on mitogenome and phylogenetics of the Papilionidae.http://dx.doi.org/10.1080/23802359.2022.2091491papilio nephelus chaonpapilio epycidespapilionidaemitochondrial genomephylogenetic analysis |
| spellingShingle | Zhentian Yan Mingjuan Lu Site Luo Shulin He Wenbo Fu Xueqian Wang Zhenhuai Fan Danlan Hu Bin Chen Complete mitochondrial genomes of Papilio nephelus chaon and Papilio epycides (Lepidoptera: Papilionidae: Papilioninae) and phylogenetic analysis Mitochondrial DNA. Part B. Resources papilio nephelus chaon papilio epycides papilionidae mitochondrial genome phylogenetic analysis |
| title | Complete mitochondrial genomes of Papilio nephelus chaon and Papilio epycides (Lepidoptera: Papilionidae: Papilioninae) and phylogenetic analysis |
| title_full | Complete mitochondrial genomes of Papilio nephelus chaon and Papilio epycides (Lepidoptera: Papilionidae: Papilioninae) and phylogenetic analysis |
| title_fullStr | Complete mitochondrial genomes of Papilio nephelus chaon and Papilio epycides (Lepidoptera: Papilionidae: Papilioninae) and phylogenetic analysis |
| title_full_unstemmed | Complete mitochondrial genomes of Papilio nephelus chaon and Papilio epycides (Lepidoptera: Papilionidae: Papilioninae) and phylogenetic analysis |
| title_short | Complete mitochondrial genomes of Papilio nephelus chaon and Papilio epycides (Lepidoptera: Papilionidae: Papilioninae) and phylogenetic analysis |
| title_sort | complete mitochondrial genomes of papilio nephelus chaon and papilio epycides lepidoptera papilionidae papilioninae and phylogenetic analysis |
| topic | papilio nephelus chaon papilio epycides papilionidae mitochondrial genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2022.2091491 |
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