The complete mitochondrial genome of a marine polychaete, Prionospio cf. japonica (Annelida: Spionidae)
Prionospio Malmgren is one of the abundant genera of the family Spionidae Grube, 1850. Despite its rich diversity, information on their complete mitochondrial genome has remained unknown. In this study, we determined the complete mitochondrial genome of a spionid polychaete, Prionospio cf. japonica...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2023-09-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2023.2241696 |
| _version_ | 1827772086099116032 |
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| author | Geon Hyeok Lee Gi-Sik Min |
| author_facet | Geon Hyeok Lee Gi-Sik Min |
| author_sort | Geon Hyeok Lee |
| collection | DOAJ |
| description | Prionospio Malmgren is one of the abundant genera of the family Spionidae Grube, 1850. Despite its rich diversity, information on their complete mitochondrial genome has remained unknown. In this study, we determined the complete mitochondrial genome of a spionid polychaete, Prionospio cf. japonica Okuda . The specimen was collected from the fine sand in the intertidal zone of South Korea. The mitogenome consists of 15,267 base pairs, harboring 13 protein-coding genes (PCGs), 22 transfer RNAs, and two ribosomal RNAs. The maximum-likelihood phylogenetic tree based on the 11 PCGs showed that Prionospio cf. japonica grouped with other spionid polychaetes and formed a monophyletic group. Also, the mtDNA of P. cf. japonica was more closely related to that of non-polydorin spionid, Marenzelleria neglecta, than polydorin spionids. The molecular data will be valuable for studying evolutionary relationships among annelids. |
| first_indexed | 2024-03-11T13:03:21Z |
| format | Article |
| id | doaj.art-4bc3471c367e41329441e81c04b07037 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:03:21Z |
| publishDate | 2023-09-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-4bc3471c367e41329441e81c04b070372023-11-03T14:44:08ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592023-09-018998598810.1080/23802359.2023.22416962241696The complete mitochondrial genome of a marine polychaete, Prionospio cf. japonica (Annelida: Spionidae)Geon Hyeok Lee0Gi-Sik Min1Department of Biological Sciences and Bioengineering, Inha UniversityDepartment of Biological Sciences and Bioengineering, Inha UniversityPrionospio Malmgren is one of the abundant genera of the family Spionidae Grube, 1850. Despite its rich diversity, information on their complete mitochondrial genome has remained unknown. In this study, we determined the complete mitochondrial genome of a spionid polychaete, Prionospio cf. japonica Okuda . The specimen was collected from the fine sand in the intertidal zone of South Korea. The mitogenome consists of 15,267 base pairs, harboring 13 protein-coding genes (PCGs), 22 transfer RNAs, and two ribosomal RNAs. The maximum-likelihood phylogenetic tree based on the 11 PCGs showed that Prionospio cf. japonica grouped with other spionid polychaetes and formed a monophyletic group. Also, the mtDNA of P. cf. japonica was more closely related to that of non-polydorin spionid, Marenzelleria neglecta, than polydorin spionids. The molecular data will be valuable for studying evolutionary relationships among annelids.http://dx.doi.org/10.1080/23802359.2023.2241696prionospio cf. japonicaillumina sequencingmitogenomemtdnaphylogenykorea |
| spellingShingle | Geon Hyeok Lee Gi-Sik Min The complete mitochondrial genome of a marine polychaete, Prionospio cf. japonica (Annelida: Spionidae) Mitochondrial DNA. Part B. Resources prionospio cf. japonica illumina sequencing mitogenome mtdna phylogeny korea |
| title | The complete mitochondrial genome of a marine polychaete, Prionospio cf. japonica (Annelida: Spionidae) |
| title_full | The complete mitochondrial genome of a marine polychaete, Prionospio cf. japonica (Annelida: Spionidae) |
| title_fullStr | The complete mitochondrial genome of a marine polychaete, Prionospio cf. japonica (Annelida: Spionidae) |
| title_full_unstemmed | The complete mitochondrial genome of a marine polychaete, Prionospio cf. japonica (Annelida: Spionidae) |
| title_short | The complete mitochondrial genome of a marine polychaete, Prionospio cf. japonica (Annelida: Spionidae) |
| title_sort | complete mitochondrial genome of a marine polychaete prionospio cf japonica annelida spionidae |
| topic | prionospio cf. japonica illumina sequencing mitogenome mtdna phylogeny korea |
| url | http://dx.doi.org/10.1080/23802359.2023.2241696 |
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