Characterization of the complete plastid genome of Craniotome Rchb., a monotypic genus of Pogostemoneae, Lamiaceae
Craniotome Rchb. is a monotypic genus of Lamiaceae. In this study, the complete plastid genome of the species C. furcata (Link) Kuntze was sequenced and assembled. The plastid genome obtained is 152,521 bp in length, including a pair of inverted repeat (IRa and IRb) regions of 25,596 bp, a large sin...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1793700 |
| _version_ | 1797639146740645888 |
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| author | Yongbin Wu Gang Yao |
| author_facet | Yongbin Wu Gang Yao |
| author_sort | Yongbin Wu |
| collection | DOAJ |
| description | Craniotome Rchb. is a monotypic genus of Lamiaceae. In this study, the complete plastid genome of the species C. furcata (Link) Kuntze was sequenced and assembled. The plastid genome obtained is 152,521 bp in length, including a pair of inverted repeat (IRa and IRb) regions of 25,596 bp, a large single-copy (LSC) region of 83,690 bp, and a small single-copy (SSC) region of 17,639 bp. The genome encoded 113 unique genes, including 79 protein-coding genes, 4 ribosomal RNA genes, and 30 transfer RNA genes. The overall GC content of the genome obtained is 38.29%. The phylogenetic analysis based on 37 plastid genome of Lamiaceae revealed that the genus Craniotome was sister to the Anisomeles-Pogostemon clade with strong support. |
| first_indexed | 2024-03-11T13:12:29Z |
| format | Article |
| id | doaj.art-4c464c0fd039488388e41c5c8cbe1128 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:12:29Z |
| publishDate | 2020-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-4c464c0fd039488388e41c5c8cbe11282023-11-03T14:00:31ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-07-01532974297510.1080/23802359.2020.17937001793700Characterization of the complete plastid genome of Craniotome Rchb., a monotypic genus of Pogostemoneae, LamiaceaeYongbin Wu0Gang Yao1College of Forestry and Landscape Architecture, South China Agricultural UniversityCollege of Forestry and Landscape Architecture, South China Agricultural UniversityCraniotome Rchb. is a monotypic genus of Lamiaceae. In this study, the complete plastid genome of the species C. furcata (Link) Kuntze was sequenced and assembled. The plastid genome obtained is 152,521 bp in length, including a pair of inverted repeat (IRa and IRb) regions of 25,596 bp, a large single-copy (LSC) region of 83,690 bp, and a small single-copy (SSC) region of 17,639 bp. The genome encoded 113 unique genes, including 79 protein-coding genes, 4 ribosomal RNA genes, and 30 transfer RNA genes. The overall GC content of the genome obtained is 38.29%. The phylogenetic analysis based on 37 plastid genome of Lamiaceae revealed that the genus Craniotome was sister to the Anisomeles-Pogostemon clade with strong support.http://dx.doi.org/10.1080/23802359.2020.1793700lamiaceaepogostemoneaeplastid phylogenomicscraniotome |
| spellingShingle | Yongbin Wu Gang Yao Characterization of the complete plastid genome of Craniotome Rchb., a monotypic genus of Pogostemoneae, Lamiaceae Mitochondrial DNA. Part B. Resources lamiaceae pogostemoneae plastid phylogenomics craniotome |
| title | Characterization of the complete plastid genome of Craniotome Rchb., a monotypic genus of Pogostemoneae, Lamiaceae |
| title_full | Characterization of the complete plastid genome of Craniotome Rchb., a monotypic genus of Pogostemoneae, Lamiaceae |
| title_fullStr | Characterization of the complete plastid genome of Craniotome Rchb., a monotypic genus of Pogostemoneae, Lamiaceae |
| title_full_unstemmed | Characterization of the complete plastid genome of Craniotome Rchb., a monotypic genus of Pogostemoneae, Lamiaceae |
| title_short | Characterization of the complete plastid genome of Craniotome Rchb., a monotypic genus of Pogostemoneae, Lamiaceae |
| title_sort | characterization of the complete plastid genome of craniotome rchb a monotypic genus of pogostemoneae lamiaceae |
| topic | lamiaceae pogostemoneae plastid phylogenomics craniotome |
| url | http://dx.doi.org/10.1080/23802359.2020.1793700 |
| work_keys_str_mv | AT yongbinwu characterizationofthecompleteplastidgenomeofcraniotomerchbamonotypicgenusofpogostemoneaelamiaceae AT gangyao characterizationofthecompleteplastidgenomeofcraniotomerchbamonotypicgenusofpogostemoneaelamiaceae |