The complete chloroplast genome of Ilex ‘Tall Boy’, Ilex aquifolium × Ilex latifolia (Aquifoliaceae)
Thecomplete chloroplast (cp) genome of Ilex ‘Tall Boy’, an important economic plant with ornamental and ecological values, was sequenced to investigate its phylogenetic relationship. The entire cp genome of ‘Tall Boy’ was 157,527 bp in length with 37.65% overall GC content, including a large single-...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1852898 |
| _version_ | 1797638999224877056 |
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| author | Fan Zhang Yanwei Zhou Hong Chen Naiwei Li Chuanyong Wang Xiaoqing Lu Yunlong Li |
| author_facet | Fan Zhang Yanwei Zhou Hong Chen Naiwei Li Chuanyong Wang Xiaoqing Lu Yunlong Li |
| author_sort | Fan Zhang |
| collection | DOAJ |
| description | Thecomplete chloroplast (cp) genome of Ilex ‘Tall Boy’, an important economic plant with ornamental and ecological values, was sequenced to investigate its phylogenetic relationship. The entire cp genome of ‘Tall Boy’ was 157,527 bp in length with 37.65% overall GC content, including a large single-copy (LSC) region of 87,044 bp and a small single-copy (SSC) region of 18,429 bp, which were separated by a pair of inverted repeats (IRs) of 52,054 bp. The cp genome contained 135 genes, including 90 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on whole cp genome sequences showed that ‘Tall Boy’ is closest to I. latifolia Thunb. species. |
| first_indexed | 2024-03-11T13:11:31Z |
| format | Article |
| id | doaj.art-4c4e9eae376b4471a34d56c3fb6f2503 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:11:31Z |
| publishDate | 2021-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-4c4e9eae376b4471a34d56c3fb6f25032023-11-03T14:08:17ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-01-016122923010.1080/23802359.2020.18528981852898The complete chloroplast genome of Ilex ‘Tall Boy’, Ilex aquifolium × Ilex latifolia (Aquifoliaceae)Fan Zhang0Yanwei Zhou1Hong Chen2Naiwei Li3Chuanyong Wang4Xiaoqing Lu5Yunlong Li6Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of SciencesJiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of SciencesJiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of SciencesJiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of SciencesJiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of SciencesJiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of SciencesJiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of SciencesThecomplete chloroplast (cp) genome of Ilex ‘Tall Boy’, an important economic plant with ornamental and ecological values, was sequenced to investigate its phylogenetic relationship. The entire cp genome of ‘Tall Boy’ was 157,527 bp in length with 37.65% overall GC content, including a large single-copy (LSC) region of 87,044 bp and a small single-copy (SSC) region of 18,429 bp, which were separated by a pair of inverted repeats (IRs) of 52,054 bp. The cp genome contained 135 genes, including 90 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on whole cp genome sequences showed that ‘Tall Boy’ is closest to I. latifolia Thunb. species.http://dx.doi.org/10.1080/23802359.2020.1852898ilex ‘tall boy’complete chloroplast genomephylogenetic analysis |
| spellingShingle | Fan Zhang Yanwei Zhou Hong Chen Naiwei Li Chuanyong Wang Xiaoqing Lu Yunlong Li The complete chloroplast genome of Ilex ‘Tall Boy’, Ilex aquifolium × Ilex latifolia (Aquifoliaceae) Mitochondrial DNA. Part B. Resources ilex ‘tall boy’ complete chloroplast genome phylogenetic analysis |
| title | The complete chloroplast genome of Ilex ‘Tall Boy’, Ilex aquifolium × Ilex latifolia (Aquifoliaceae) |
| title_full | The complete chloroplast genome of Ilex ‘Tall Boy’, Ilex aquifolium × Ilex latifolia (Aquifoliaceae) |
| title_fullStr | The complete chloroplast genome of Ilex ‘Tall Boy’, Ilex aquifolium × Ilex latifolia (Aquifoliaceae) |
| title_full_unstemmed | The complete chloroplast genome of Ilex ‘Tall Boy’, Ilex aquifolium × Ilex latifolia (Aquifoliaceae) |
| title_short | The complete chloroplast genome of Ilex ‘Tall Boy’, Ilex aquifolium × Ilex latifolia (Aquifoliaceae) |
| title_sort | complete chloroplast genome of ilex tall boy ilex aquifolium ilex latifolia aquifoliaceae |
| topic | ilex ‘tall boy’ complete chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2020.1852898 |
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