The complete chloroplast genome of Primula obconica (Primulaceae)
We report the complete chloroplast genome of Primula obconica, a popular house-plant all over the world. The complete chloroplast genome of P. obconica was sequenced using an Illumina Miseq platform. The circular genome is 153,694 bp in length and comprises a large single copy (LSC, 84,485 bp) regio...
| Main Authors: | , , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2019-07-01
|
| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1623101 |
| _version_ | 1827773395080577024 |
|---|---|
| author | Caiyun Zhang Xun Yuan Tao Yang Haifei Yan Tongjian Liu |
| author_facet | Caiyun Zhang Xun Yuan Tao Yang Haifei Yan Tongjian Liu |
| author_sort | Caiyun Zhang |
| collection | DOAJ |
| description | We report the complete chloroplast genome of Primula obconica, a popular house-plant all over the world. The complete chloroplast genome of P. obconica was sequenced using an Illumina Miseq platform. The circular genome is 153,694 bp in length and comprises a large single copy (LSC, 84,485 bp) region and a small single copy (SSC, 17,689 bp) region, which are separated by a pair of inverted repeats (IRa and IRb, 25,760 bp each). The overall GC content is 37.2%. The P. obconica chloroplast genome encodes 113 unique genes, including 79 protein-coding genes, 30 transfer RNA (tRNA) genes, and four ribosomal RNA (rRNA) genes. Phylogenetic analysis based on 18 chloroplast genomes indicates that P. obconica is closely related to the clade of Primula sect. Carolinella, sect. Corusoides and sect. Monocarpicae. |
| first_indexed | 2024-03-11T13:22:19Z |
| format | Article |
| id | doaj.art-4c7cdeca3bd04379bb45c7efe775d178 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:22:19Z |
| publishDate | 2019-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-4c7cdeca3bd04379bb45c7efe775d1782023-11-03T10:06:47ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-07-01422189219010.1080/23802359.2019.16231011623101The complete chloroplast genome of Primula obconica (Primulaceae)Caiyun Zhang0Xun Yuan1Tao Yang2Haifei Yan3Tongjian Liu4Guangdong Food and Drug Vocational CollegeSouth China Agricultural UniversityChinese Academy of SciencesChinese Academy of SciencesChinese Academy of SciencesWe report the complete chloroplast genome of Primula obconica, a popular house-plant all over the world. The complete chloroplast genome of P. obconica was sequenced using an Illumina Miseq platform. The circular genome is 153,694 bp in length and comprises a large single copy (LSC, 84,485 bp) region and a small single copy (SSC, 17,689 bp) region, which are separated by a pair of inverted repeats (IRa and IRb, 25,760 bp each). The overall GC content is 37.2%. The P. obconica chloroplast genome encodes 113 unique genes, including 79 protein-coding genes, 30 transfer RNA (tRNA) genes, and four ribosomal RNA (rRNA) genes. Phylogenetic analysis based on 18 chloroplast genomes indicates that P. obconica is closely related to the clade of Primula sect. Carolinella, sect. Corusoides and sect. Monocarpicae.http://dx.doi.org/10.1080/23802359.2019.1623101illumina sequencingprimula obconicaplastid genomephylogenetic analysis |
| spellingShingle | Caiyun Zhang Xun Yuan Tao Yang Haifei Yan Tongjian Liu The complete chloroplast genome of Primula obconica (Primulaceae) Mitochondrial DNA. Part B. Resources illumina sequencing primula obconica plastid genome phylogenetic analysis |
| title | The complete chloroplast genome of Primula obconica (Primulaceae) |
| title_full | The complete chloroplast genome of Primula obconica (Primulaceae) |
| title_fullStr | The complete chloroplast genome of Primula obconica (Primulaceae) |
| title_full_unstemmed | The complete chloroplast genome of Primula obconica (Primulaceae) |
| title_short | The complete chloroplast genome of Primula obconica (Primulaceae) |
| title_sort | complete chloroplast genome of primula obconica primulaceae |
| topic | illumina sequencing primula obconica plastid genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2019.1623101 |
| work_keys_str_mv | AT caiyunzhang thecompletechloroplastgenomeofprimulaobconicaprimulaceae AT xunyuan thecompletechloroplastgenomeofprimulaobconicaprimulaceae AT taoyang thecompletechloroplastgenomeofprimulaobconicaprimulaceae AT haifeiyan thecompletechloroplastgenomeofprimulaobconicaprimulaceae AT tongjianliu thecompletechloroplastgenomeofprimulaobconicaprimulaceae AT caiyunzhang completechloroplastgenomeofprimulaobconicaprimulaceae AT xunyuan completechloroplastgenomeofprimulaobconicaprimulaceae AT taoyang completechloroplastgenomeofprimulaobconicaprimulaceae AT haifeiyan completechloroplastgenomeofprimulaobconicaprimulaceae AT tongjianliu completechloroplastgenomeofprimulaobconicaprimulaceae |