Complete chloroplast genome sequence and phylogenetic analysis of Clerodendrum japonicum (Thunb.) Sweet (Ajugoideae, Lamiaceae)
Clerodendrum japonicum (Thunb.) Sweet belongs to the genus Clerodendrum in the family Lamiaceae. It is an important medicinal plant with great ornamental and economic value. We sequenced and analyzed the complete chloroplast genome of C. japonicum by Illumina sequencing in this study. The full lengt...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-08-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1944367 |
| _version_ | 1797638779505213440 |
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| author | Gang Chen Li-guo Wang Ying-hua Wang |
| author_facet | Gang Chen Li-guo Wang Ying-hua Wang |
| author_sort | Gang Chen |
| collection | DOAJ |
| description | Clerodendrum japonicum (Thunb.) Sweet belongs to the genus Clerodendrum in the family Lamiaceae. It is an important medicinal plant with great ornamental and economic value. We sequenced and analyzed the complete chloroplast genome of C. japonicum by Illumina sequencing in this study. The full length of the complete chloroplast genome is 152,215 bp, containing a pair of inverted repeat regions of 25,705 bp (IRa and IRb) separated by a large single-copy region (LSC) of 83,491 bp and a small single-copy region (SSC) of 17,314 bp. The C. japonicum chloroplast genome encodes 131 genes, comprising 85 protein-coding genes, 37 tRNA genes, 8 rRNA genes, and 1 pseudogene. This study will be useful for further study on population, phylogenetic, and molecular genetic studies of this medicinal plant. |
| first_indexed | 2024-03-11T13:08:28Z |
| format | Article |
| id | doaj.art-4c7f1a6ecea347b3807c37d68e43d69c |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:08:28Z |
| publishDate | 2021-08-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-4c7f1a6ecea347b3807c37d68e43d69c2023-11-03T14:28:28ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-08-01682218222010.1080/23802359.2021.19443671944367Complete chloroplast genome sequence and phylogenetic analysis of Clerodendrum japonicum (Thunb.) Sweet (Ajugoideae, Lamiaceae)Gang Chen0Li-guo Wang1Ying-hua Wang2College of Life Sciences, Zhaoqing UniversityLaboratory of Germplasm Resources and Molecular Identification of Traditional Chinese Medicine, School of Pharmaceutical Sciences, Guangzhou University of Chinese MedicineCollege of Life Sciences, Zhaoqing UniversityClerodendrum japonicum (Thunb.) Sweet belongs to the genus Clerodendrum in the family Lamiaceae. It is an important medicinal plant with great ornamental and economic value. We sequenced and analyzed the complete chloroplast genome of C. japonicum by Illumina sequencing in this study. The full length of the complete chloroplast genome is 152,215 bp, containing a pair of inverted repeat regions of 25,705 bp (IRa and IRb) separated by a large single-copy region (LSC) of 83,491 bp and a small single-copy region (SSC) of 17,314 bp. The C. japonicum chloroplast genome encodes 131 genes, comprising 85 protein-coding genes, 37 tRNA genes, 8 rRNA genes, and 1 pseudogene. This study will be useful for further study on population, phylogenetic, and molecular genetic studies of this medicinal plant.http://dx.doi.org/10.1080/23802359.2021.1944367chloroplast genomephylogenetic analysisclerodendrum japonicum (thunb.) sweet |
| spellingShingle | Gang Chen Li-guo Wang Ying-hua Wang Complete chloroplast genome sequence and phylogenetic analysis of Clerodendrum japonicum (Thunb.) Sweet (Ajugoideae, Lamiaceae) Mitochondrial DNA. Part B. Resources chloroplast genome phylogenetic analysis clerodendrum japonicum (thunb.) sweet |
| title | Complete chloroplast genome sequence and phylogenetic analysis of Clerodendrum japonicum (Thunb.) Sweet (Ajugoideae, Lamiaceae) |
| title_full | Complete chloroplast genome sequence and phylogenetic analysis of Clerodendrum japonicum (Thunb.) Sweet (Ajugoideae, Lamiaceae) |
| title_fullStr | Complete chloroplast genome sequence and phylogenetic analysis of Clerodendrum japonicum (Thunb.) Sweet (Ajugoideae, Lamiaceae) |
| title_full_unstemmed | Complete chloroplast genome sequence and phylogenetic analysis of Clerodendrum japonicum (Thunb.) Sweet (Ajugoideae, Lamiaceae) |
| title_short | Complete chloroplast genome sequence and phylogenetic analysis of Clerodendrum japonicum (Thunb.) Sweet (Ajugoideae, Lamiaceae) |
| title_sort | complete chloroplast genome sequence and phylogenetic analysis of clerodendrum japonicum thunb sweet ajugoideae lamiaceae |
| topic | chloroplast genome phylogenetic analysis clerodendrum japonicum (thunb.) sweet |
| url | http://dx.doi.org/10.1080/23802359.2021.1944367 |
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