Fidelity varies in the symbiosis between a gutless marine worm and its microbial consortium

Abstract Background Many animals live in intimate associations with a species-rich microbiome. A key factor in maintaining these beneficial associations is fidelity, defined as the stability of associations between hosts and their microbiota over multiple host generations. Fidelity has been well stu...

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Main Authors: Yui Sato, Juliane Wippler, Cecilia Wentrup, Rebecca Ansorge, Miriam Sadowski, Harald Gruber-Vodicka, Nicole Dubilier, Manuel Kleiner
Format: Article
Language:English
Published: BMC 2022-10-01
Series:Microbiome
Subjects:
Online Access:https://doi.org/10.1186/s40168-022-01372-2
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author Yui Sato
Juliane Wippler
Cecilia Wentrup
Rebecca Ansorge
Miriam Sadowski
Harald Gruber-Vodicka
Nicole Dubilier
Manuel Kleiner
author_facet Yui Sato
Juliane Wippler
Cecilia Wentrup
Rebecca Ansorge
Miriam Sadowski
Harald Gruber-Vodicka
Nicole Dubilier
Manuel Kleiner
author_sort Yui Sato
collection DOAJ
description Abstract Background Many animals live in intimate associations with a species-rich microbiome. A key factor in maintaining these beneficial associations is fidelity, defined as the stability of associations between hosts and their microbiota over multiple host generations. Fidelity has been well studied in terrestrial hosts, particularly insects, over longer macroevolutionary time. In contrast, little is known about fidelity in marine animals with species-rich microbiomes at short microevolutionary time scales, that is at the level of a single host population. Given that natural selection acts most directly on local populations, studies of microevolutionary partner fidelity are important for revealing the ecological and evolutionary processes that drive intimate beneficial associations within animal species. Results In this study on the obligate symbiosis between the gutless marine annelid Olavius algarvensis and its consortium of seven co-occurring bacterial symbionts, we show that partner fidelity varies across symbiont species from strict to absent over short microevolutionary time. Using a low-coverage sequencing approach that has not yet been applied to microbial community analyses, we analysed the metagenomes of 80 O. algarvensis individuals from the Mediterranean and compared host mitochondrial and symbiont phylogenies based on single-nucleotide polymorphisms across genomes. Fidelity was highest for the two chemoautotrophic, sulphur-oxidizing symbionts that dominated the microbial consortium of all O. algarvensis individuals. In contrast, fidelity was only intermediate to absent in the sulphate-reducing and spirochaetal symbionts with lower abundance. These differences in fidelity are likely driven by both selective and stochastic forces acting on the consistency with which symbionts are vertically transmitted. Conclusions We hypothesize that variable degrees of fidelity are advantageous for O. algarvensis by allowing the faithful transmission of their nutritionally most important symbionts and flexibility in the acquisition of other symbionts that promote ecological plasticity in the acquisition of environmental resources. Video Abstract
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spelling doaj.art-4ccf2dcdef70483fb93c8338be6ec44e2022-12-22T02:37:13ZengBMCMicrobiome2049-26182022-10-0110111810.1186/s40168-022-01372-2Fidelity varies in the symbiosis between a gutless marine worm and its microbial consortiumYui Sato0Juliane Wippler1Cecilia Wentrup2Rebecca Ansorge3Miriam Sadowski4Harald Gruber-Vodicka5Nicole Dubilier6Manuel Kleiner7Max Planck Institute for Marine MicrobiologyMax Planck Institute for Marine MicrobiologyMax Planck Institute for Marine MicrobiologyMax Planck Institute for Marine MicrobiologyMax Planck Institute for Marine MicrobiologyMax Planck Institute for Marine MicrobiologyMax Planck Institute for Marine MicrobiologyDepartment of Plant and Microbial Biology, North Carolina State UniversityAbstract Background Many animals live in intimate associations with a species-rich microbiome. A key factor in maintaining these beneficial associations is fidelity, defined as the stability of associations between hosts and their microbiota over multiple host generations. Fidelity has been well studied in terrestrial hosts, particularly insects, over longer macroevolutionary time. In contrast, little is known about fidelity in marine animals with species-rich microbiomes at short microevolutionary time scales, that is at the level of a single host population. Given that natural selection acts most directly on local populations, studies of microevolutionary partner fidelity are important for revealing the ecological and evolutionary processes that drive intimate beneficial associations within animal species. Results In this study on the obligate symbiosis between the gutless marine annelid Olavius algarvensis and its consortium of seven co-occurring bacterial symbionts, we show that partner fidelity varies across symbiont species from strict to absent over short microevolutionary time. Using a low-coverage sequencing approach that has not yet been applied to microbial community analyses, we analysed the metagenomes of 80 O. algarvensis individuals from the Mediterranean and compared host mitochondrial and symbiont phylogenies based on single-nucleotide polymorphisms across genomes. Fidelity was highest for the two chemoautotrophic, sulphur-oxidizing symbionts that dominated the microbial consortium of all O. algarvensis individuals. In contrast, fidelity was only intermediate to absent in the sulphate-reducing and spirochaetal symbionts with lower abundance. These differences in fidelity are likely driven by both selective and stochastic forces acting on the consistency with which symbionts are vertically transmitted. Conclusions We hypothesize that variable degrees of fidelity are advantageous for O. algarvensis by allowing the faithful transmission of their nutritionally most important symbionts and flexibility in the acquisition of other symbionts that promote ecological plasticity in the acquisition of environmental resources. Video Abstracthttps://doi.org/10.1186/s40168-022-01372-2MicrobiomeAnimal-bacterial symbiosisSymbiont transmissionPhylosymbiosisIntraspecific genetic variation
spellingShingle Yui Sato
Juliane Wippler
Cecilia Wentrup
Rebecca Ansorge
Miriam Sadowski
Harald Gruber-Vodicka
Nicole Dubilier
Manuel Kleiner
Fidelity varies in the symbiosis between a gutless marine worm and its microbial consortium
Microbiome
Microbiome
Animal-bacterial symbiosis
Symbiont transmission
Phylosymbiosis
Intraspecific genetic variation
title Fidelity varies in the symbiosis between a gutless marine worm and its microbial consortium
title_full Fidelity varies in the symbiosis between a gutless marine worm and its microbial consortium
title_fullStr Fidelity varies in the symbiosis between a gutless marine worm and its microbial consortium
title_full_unstemmed Fidelity varies in the symbiosis between a gutless marine worm and its microbial consortium
title_short Fidelity varies in the symbiosis between a gutless marine worm and its microbial consortium
title_sort fidelity varies in the symbiosis between a gutless marine worm and its microbial consortium
topic Microbiome
Animal-bacterial symbiosis
Symbiont transmission
Phylosymbiosis
Intraspecific genetic variation
url https://doi.org/10.1186/s40168-022-01372-2
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