Systematic analysis of alternative first exons in plant genomes

Systematic analysis of alternative first exons in plant genomes

<p>Abstract</p> <p>Background</p> <p>Alternative splicing (AS) contributes significantly to protein diversity, by selectively using different combinations of exons of the same gene under certain circumstances. One particular type of AS is the use of alternative first ex...

Full description

Bibliographic Details
Main Authors:	Zeng Changqing, Lv Congying, Lv Guanting, Chen Wei-Hua, Hu Songnian
Format:	Article
Language:	English
Published:	BMC 2007-10-01
Series:	BMC Plant Biology
Online Access:	http://www.biomedcentral.com/1471-2229/7/55

Similar Items

LncRNA BCLET variant confers bladder cancer susceptibility through alternative splicing of MSANTD2 exon 1
by: Hanting Liu, et al.
Published: (2023-07-01)

CRISPR/Cas9-mediated genome editing induces exon skipping by alternative splicing or exon deletion
by: Yin, Hao, et al.
Published: (2019)

CRISPR/Cas9-mediated genome editing induces exon skipping by alternative splicing or exon deletion
by: Haiwei Mou, et al.
Published: (2017-06-01)

Assessing the number of ancestral alternatively spliced exons in the human genome
by: Sorek Rotem, et al.
Published: (2006-10-01)

First Identification of RNA-Binding Proteins That Regulate Alternative Exons in the Dystrophin Gene
by: Julie Miro, et al.
Published: (2020-10-01)

Genome-Wide Survey of Exonization to Enrich Transcriptomes and Proteomes in Plants
by: Li-yu Daisy Liu, et al.
Published: (2012-01-01)

Prediction of alternatively skipped exons and splicing enhancers from exon junction arrays
by: Yeh Ru-Fang, et al.
Published: (2008-11-01)

The emergence of alternative 3' and 5' splice site exons from constitutive exons.
by: Eli Koren, et al.
Published: (2007-05-01)

Universal alternative splicing of noncoding exons
by: Deveson, I, et al.
Published: (2018)

Computational detection of alternative exon usage
by: Ted G Laderas, et al.
Published: (2011-05-01)

Effect of exonic splicing regulation on synonymous codon usage in alternatively spliced exons of <it>Dscam</it>
by: Takahashi Aya
Published: (2009-08-01)

Evolution of exon-intron structure and alternative splicing.
by: Tomasz E Koralewski, et al.
Published: (2011-01-01)

The "alternative" choice of constitutive exons throughout evolution.
by: Galit Lev-Maor, et al.
Published: (2007-11-01)

Recognition of unknown conserved alternatively spliced exons.
Published: (2005-07-01)

Tau exon 10 alternative splicing and tauopathies
by: Liu Fei, et al.
Published: (2008-07-01)

Alternative splicing and transcriptome profiling of experimental autoimmune encephalomyelitis using genome-wide exon arrays.
by: Alan Gillett, et al.
Published: (2009-01-01)

The complete mitochondrial genome of Gossypium hirsutum and evolutionary analysis of higher plant mitochondrial genomes.
by: Guozheng Liu, et al.
Published: (2013-01-01)

Tumor-specific usage of alternative transcription start sites in colorectal cancer identified by genome-wide exon array analysis
by: Laurila Kirsti, et al.
Published: (2011-10-01)

Identification and evolutionary analysis of novel exons and alternative splicing events using cross-species EST-to-genome comparisons in human, mouse and rat
by: Ho Jar-Yi, et al.
Published: (2006-03-01)

Splice site proximity influences alternative exon definition
by: Francisco Carranza, et al.
Published: (2022-12-01)

Mutations primarily alter the inclusion of alternatively spliced exons
by: Pablo Baeza-Centurion, et al.
Published: (2020-10-01)

Studies of exon scrambling and mutually exclusive alternative splicing
by: Kong, Rong, 1979-
Published: (2005)

Tissue-specific classification of alternatively spliced human exons
by: Rothman, Craig Jeremy
Published: (2008)

Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array
by: Sugnet Charles, et al.
Published: (2006-12-01)

Genome-wide analysis of antisense transcription with Affymetrix exon array
by: Jung Yong-chul, et al.
Published: (2008-01-01)

Alternative First Exons Drive Enzymatic Activity Variation in Chalcone Synthase 3 of <i>Dendrobium sinense</i>
by: Yu Wang, et al.
Published: (2023-08-01)

Characterization of regulatory mechanisms for BIM exon 3 alternative splicing
by: Bhadra, Malini
Published: (2017)

Protein modularity of alternatively spliced exons is associated with tissue-specific regulation of alternative splicing.
by: Yi Xing, et al.
Published: (2005-09-01)

Protein Modularity of Alternatively Spliced Exons Is Associated with Tissue-Specific Regulation of Alternative Splicing.
Published: (2005-09-01)

Histone posttranslational modifications predict specific alternative exon subtypes in mammalian brain.
by: Qiwen Hu, et al.
Published: (2017-06-01)

Exonization of the LTR transposable elements in human genome
by: Borodovsky Mark, et al.
Published: (2007-08-01)

Classifying Included and Excluded Exons in Exon Skipping Event Using Histone Modifications
by: Wei Chen, et al.
Published: (2018-10-01)

Widespread Separation of the Polypyrimidine Tract From 3′ AG by G Tracts in Association With Alternative Exons in Metazoa and Plants
by: Hai Nguyen, et al.
Published: (2019-01-01)

First-line Treatment with Furmonertinib Mesylate in Lung Adenocarcinoma Patient  with EGFR Exon 20 Insertion Mutantion
by: Zhengguo LI, et al.
Published: (2024-03-01)

First Identification of Rare Exonic and Deep Intronic Splice-Altering Variants in Patients With Beta-Sarcoglycanopathy
by: Zhiying Xie, et al.
Published: (2022-06-01)

Genomic structure of DNA encoding the lymphocyte homing receptor CD44 reveals at least 12 alternatively spliced exons.
by: Screaton, G, et al.
Published: (1992)

Revised genomic structure of the human ghrelin gene and identification of novel exons, alternative splice variants and natural antisense transcripts
by: Herington Adrian C, et al.
Published: (2007-08-01)

Splicing activates transcription from weak promoters upstream of alternative exons
by: Maritere Uriostegui-Arcos, et al.
Published: (2023-06-01)

Splicing complexity as a pivotal feature of alternative exons in mammalian species
by: Feiyang Zhao, et al.
Published: (2023-04-01)

Distal Alternative Last Exons Localize mRNAs to Neural Projections
by: Vidaki, Marina, et al.
Published: (2018)