Diagnosis of Bloodstream Infections: An Evolution of Technologies towards Accurate and Rapid Identification and Antibiotic Susceptibility Testing

Bloodstream infections (BSI) are a leading cause of death worldwide. The lack of timely and reliable diagnostic practices is an ongoing issue for managing BSI. The current gold standard blood culture practice for pathogen identification and antibiotic susceptibility testing is time-consuming. Delaye...

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Main Authors: Kristel C. Tjandra, Nikhil Ram-Mohan, Ryuichiro Abe, Marjan M. Hashemi, Jyong-Huei Lee, Siew Mei Chin, Manuel A. Roshardt, Joseph C. Liao, Pak Kin Wong, Samuel Yang
Format: Article
Language:English
Published: MDPI AG 2022-04-01
Series:Antibiotics
Subjects:
Online Access:https://www.mdpi.com/2079-6382/11/4/511
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author Kristel C. Tjandra
Nikhil Ram-Mohan
Ryuichiro Abe
Marjan M. Hashemi
Jyong-Huei Lee
Siew Mei Chin
Manuel A. Roshardt
Joseph C. Liao
Pak Kin Wong
Samuel Yang
author_facet Kristel C. Tjandra
Nikhil Ram-Mohan
Ryuichiro Abe
Marjan M. Hashemi
Jyong-Huei Lee
Siew Mei Chin
Manuel A. Roshardt
Joseph C. Liao
Pak Kin Wong
Samuel Yang
author_sort Kristel C. Tjandra
collection DOAJ
description Bloodstream infections (BSI) are a leading cause of death worldwide. The lack of timely and reliable diagnostic practices is an ongoing issue for managing BSI. The current gold standard blood culture practice for pathogen identification and antibiotic susceptibility testing is time-consuming. Delayed diagnosis warrants the use of empirical antibiotics, which could lead to poor patient outcomes, and risks the development of antibiotic resistance. Hence, novel techniques that could offer accurate and timely diagnosis and susceptibility testing are urgently needed. This review focuses on BSI and highlights both the progress and shortcomings of its current diagnosis. We surveyed clinical workflows that employ recently approved technologies and showed that, while offering improved sensitivity and selectivity, these techniques are still unable to deliver a timely result. We then discuss a number of emerging technologies that have the potential to shorten the overall turnaround time of BSI diagnosis through direct testing from whole blood—while maintaining, if not improving—the current assay’s sensitivity and pathogen coverage. We concluded by providing our assessment of potential future directions for accelerating BSI pathogen identification and the antibiotic susceptibility test. While engineering solutions have enabled faster assay turnaround, further progress is still needed to supplant blood culture practice and guide appropriate antibiotic administration for BSI patients.
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spelling doaj.art-4d76dad70e554984b39b99e618f777792023-12-01T00:33:08ZengMDPI AGAntibiotics2079-63822022-04-0111451110.3390/antibiotics11040511Diagnosis of Bloodstream Infections: An Evolution of Technologies towards Accurate and Rapid Identification and Antibiotic Susceptibility TestingKristel C. Tjandra0Nikhil Ram-Mohan1Ryuichiro Abe2Marjan M. Hashemi3Jyong-Huei Lee4Siew Mei Chin5Manuel A. Roshardt6Joseph C. Liao7Pak Kin Wong8Samuel Yang9Department of Emergency Medicine, Stanford University School of Medicine, Palo Alto, CA 94305, USADepartment of Emergency Medicine, Stanford University School of Medicine, Palo Alto, CA 94305, USADepartment of Emergency Medicine, Stanford University School of Medicine, Palo Alto, CA 94305, USADepartment of Emergency Medicine, Stanford University School of Medicine, Palo Alto, CA 94305, USADepartment of Biomedical Engineering, The Pennsylvania State University, University Park, PA 16802, USADepartment of Biomedical Engineering, The Pennsylvania State University, University Park, PA 16802, USADepartment of Biomedical Engineering, The Pennsylvania State University, University Park, PA 16802, USADepartment of Urology, Stanford University School of Medicine, Stanford, CA 94305, USADepartment of Biomedical Engineering, The Pennsylvania State University, University Park, PA 16802, USADepartment of Emergency Medicine, Stanford University School of Medicine, Palo Alto, CA 94305, USABloodstream infections (BSI) are a leading cause of death worldwide. The lack of timely and reliable diagnostic practices is an ongoing issue for managing BSI. The current gold standard blood culture practice for pathogen identification and antibiotic susceptibility testing is time-consuming. Delayed diagnosis warrants the use of empirical antibiotics, which could lead to poor patient outcomes, and risks the development of antibiotic resistance. Hence, novel techniques that could offer accurate and timely diagnosis and susceptibility testing are urgently needed. This review focuses on BSI and highlights both the progress and shortcomings of its current diagnosis. We surveyed clinical workflows that employ recently approved technologies and showed that, while offering improved sensitivity and selectivity, these techniques are still unable to deliver a timely result. We then discuss a number of emerging technologies that have the potential to shorten the overall turnaround time of BSI diagnosis through direct testing from whole blood—while maintaining, if not improving—the current assay’s sensitivity and pathogen coverage. We concluded by providing our assessment of potential future directions for accelerating BSI pathogen identification and the antibiotic susceptibility test. While engineering solutions have enabled faster assay turnaround, further progress is still needed to supplant blood culture practice and guide appropriate antibiotic administration for BSI patients.https://www.mdpi.com/2079-6382/11/4/511infectious diseasessepsispathogen diagnosisantibiotic susceptibilityemerging technologiessample preparation
spellingShingle Kristel C. Tjandra
Nikhil Ram-Mohan
Ryuichiro Abe
Marjan M. Hashemi
Jyong-Huei Lee
Siew Mei Chin
Manuel A. Roshardt
Joseph C. Liao
Pak Kin Wong
Samuel Yang
Diagnosis of Bloodstream Infections: An Evolution of Technologies towards Accurate and Rapid Identification and Antibiotic Susceptibility Testing
Antibiotics
infectious diseases
sepsis
pathogen diagnosis
antibiotic susceptibility
emerging technologies
sample preparation
title Diagnosis of Bloodstream Infections: An Evolution of Technologies towards Accurate and Rapid Identification and Antibiotic Susceptibility Testing
title_full Diagnosis of Bloodstream Infections: An Evolution of Technologies towards Accurate and Rapid Identification and Antibiotic Susceptibility Testing
title_fullStr Diagnosis of Bloodstream Infections: An Evolution of Technologies towards Accurate and Rapid Identification and Antibiotic Susceptibility Testing
title_full_unstemmed Diagnosis of Bloodstream Infections: An Evolution of Technologies towards Accurate and Rapid Identification and Antibiotic Susceptibility Testing
title_short Diagnosis of Bloodstream Infections: An Evolution of Technologies towards Accurate and Rapid Identification and Antibiotic Susceptibility Testing
title_sort diagnosis of bloodstream infections an evolution of technologies towards accurate and rapid identification and antibiotic susceptibility testing
topic infectious diseases
sepsis
pathogen diagnosis
antibiotic susceptibility
emerging technologies
sample preparation
url https://www.mdpi.com/2079-6382/11/4/511
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