Discovery of a high-performance phage-derived promoter/repressor system for probiotic lactobacillus engineering

Abstract Background The Lactobacillaceae family comprises many species of great importance for the food and healthcare industries, with numerous strains identified as beneficial for humans and used as probiotics. Hence, there is a growing interest in engineering these probiotic bacteria as live biot...

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Main Authors: Marc Blanch-Asensio, Varun Sai Tadimarri, Alina Wilk, Shrikrishnan Sankaran
Format: Article
Language:English
Published: BMC 2024-02-01
Series:Microbial Cell Factories
Subjects:
Online Access:https://doi.org/10.1186/s12934-024-02302-7
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author Marc Blanch-Asensio
Varun Sai Tadimarri
Alina Wilk
Shrikrishnan Sankaran
author_facet Marc Blanch-Asensio
Varun Sai Tadimarri
Alina Wilk
Shrikrishnan Sankaran
author_sort Marc Blanch-Asensio
collection DOAJ
description Abstract Background The Lactobacillaceae family comprises many species of great importance for the food and healthcare industries, with numerous strains identified as beneficial for humans and used as probiotics. Hence, there is a growing interest in engineering these probiotic bacteria as live biotherapeutics for animals and humans. However, the genetic parts needed to regulate gene expression in these bacteria remain limited compared to model bacteria like E. coli or B. subtilis. To address this deficit, in this study, we selected and tested several bacteriophage-derived genetic parts with the potential to regulate transcription in lactobacilli. Results We screened genetic parts from 6 different lactobacilli-infecting phages and identified one promoter/repressor system with unprecedented functionality in Lactiplantibacillus plantarum WCFS1. The phage-derived promoter was found to achieve expression levels nearly 9-fold higher than the previously reported strongest promoter in this strain and the repressor was able to almost completely repress this expression by reducing it nearly 500-fold. Conclusions The new parts and insights gained from their engineering will enhance the genetic programmability of lactobacilli for healthcare and industrial applications.
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spelling doaj.art-4e4f0bb172624f55b968c0b9534d0e692024-03-06T08:06:27ZengBMCMicrobial Cell Factories1475-28592024-02-0123111310.1186/s12934-024-02302-7Discovery of a high-performance phage-derived promoter/repressor system for probiotic lactobacillus engineeringMarc Blanch-Asensio0Varun Sai Tadimarri1Alina Wilk2Shrikrishnan Sankaran3Bioprogrammable Materials, INM - Leibniz Institute for New MaterialsBioprogrammable Materials, INM - Leibniz Institute for New MaterialsBioprogrammable Materials, INM - Leibniz Institute for New MaterialsBioprogrammable Materials, INM - Leibniz Institute for New MaterialsAbstract Background The Lactobacillaceae family comprises many species of great importance for the food and healthcare industries, with numerous strains identified as beneficial for humans and used as probiotics. Hence, there is a growing interest in engineering these probiotic bacteria as live biotherapeutics for animals and humans. However, the genetic parts needed to regulate gene expression in these bacteria remain limited compared to model bacteria like E. coli or B. subtilis. To address this deficit, in this study, we selected and tested several bacteriophage-derived genetic parts with the potential to regulate transcription in lactobacilli. Results We screened genetic parts from 6 different lactobacilli-infecting phages and identified one promoter/repressor system with unprecedented functionality in Lactiplantibacillus plantarum WCFS1. The phage-derived promoter was found to achieve expression levels nearly 9-fold higher than the previously reported strongest promoter in this strain and the repressor was able to almost completely repress this expression by reducing it nearly 500-fold. Conclusions The new parts and insights gained from their engineering will enhance the genetic programmability of lactobacilli for healthcare and industrial applications.https://doi.org/10.1186/s12934-024-02302-7LactobacilliL. PlantarumProbiotic bacteriaBacteriophagePromoterRepressor.
spellingShingle Marc Blanch-Asensio
Varun Sai Tadimarri
Alina Wilk
Shrikrishnan Sankaran
Discovery of a high-performance phage-derived promoter/repressor system for probiotic lactobacillus engineering
Microbial Cell Factories
Lactobacilli
L. Plantarum
Probiotic bacteria
Bacteriophage
Promoter
Repressor.
title Discovery of a high-performance phage-derived promoter/repressor system for probiotic lactobacillus engineering
title_full Discovery of a high-performance phage-derived promoter/repressor system for probiotic lactobacillus engineering
title_fullStr Discovery of a high-performance phage-derived promoter/repressor system for probiotic lactobacillus engineering
title_full_unstemmed Discovery of a high-performance phage-derived promoter/repressor system for probiotic lactobacillus engineering
title_short Discovery of a high-performance phage-derived promoter/repressor system for probiotic lactobacillus engineering
title_sort discovery of a high performance phage derived promoter repressor system for probiotic lactobacillus engineering
topic Lactobacilli
L. Plantarum
Probiotic bacteria
Bacteriophage
Promoter
Repressor.
url https://doi.org/10.1186/s12934-024-02302-7
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