The structure of the core NuRD repression complex provides insights into its interaction with chromatin

The NuRD complex is a multi-protein transcriptional corepressor that couples histone deacetylase and ATP-dependent chromatin remodelling activities. The complex regulates the higher-order structure of chromatin, and has important roles in the regulation of gene expression, DNA damage repair and cell...

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Main Authors: Christopher J Millard, Niranjan Varma, Almutasem Saleh, Kyle Morris, Peter J Watson, Andrew R Bottrill, Louise Fairall, Corinne J Smith, John WR Schwabe
Format: Article
Language:English
Published: eLife Sciences Publications Ltd 2016-04-01
Series:eLife
Subjects:
Online Access:https://elifesciences.org/articles/13941
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author Christopher J Millard
Niranjan Varma
Almutasem Saleh
Kyle Morris
Peter J Watson
Andrew R Bottrill
Louise Fairall
Corinne J Smith
John WR Schwabe
author_facet Christopher J Millard
Niranjan Varma
Almutasem Saleh
Kyle Morris
Peter J Watson
Andrew R Bottrill
Louise Fairall
Corinne J Smith
John WR Schwabe
author_sort Christopher J Millard
collection DOAJ
description The NuRD complex is a multi-protein transcriptional corepressor that couples histone deacetylase and ATP-dependent chromatin remodelling activities. The complex regulates the higher-order structure of chromatin, and has important roles in the regulation of gene expression, DNA damage repair and cell differentiation. HDACs 1 and 2 are recruited by the MTA1 corepressor to form the catalytic core of the complex. The histone chaperone protein RBBP4, has previously been shown to bind to the carboxy-terminal tail of MTA1. We show that MTA1 recruits a second copy of RBBP4. The crystal structure reveals an extensive interface between MTA1 and RBBP4. An EM structure, supported by SAXS and crosslinking, reveals the architecture of the dimeric HDAC1:MTA1:RBBP4 assembly which forms the core of the NuRD complex. We find evidence that in this complex RBBP4 mediates interaction with histone H3 tails, but not histone H4, suggesting a mechanism for recruitment of the NuRD complex to chromatin.
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spelling doaj.art-4ec4f0e5e4d146ce9e4fdf503a7b81492022-12-22T03:33:23ZengeLife Sciences Publications LtdeLife2050-084X2016-04-01510.7554/eLife.13941The structure of the core NuRD repression complex provides insights into its interaction with chromatinChristopher J Millard0https://orcid.org/0000-0002-1012-0829Niranjan Varma1Almutasem Saleh2https://orcid.org/0000-0002-0156-4508Kyle Morris3Peter J Watson4Andrew R Bottrill5https://orcid.org/0000-0002-5182-3643Louise Fairall6Corinne J Smith7John WR Schwabe8https://orcid.org/0000-0003-2865-4383Henry Wellcome Laboratories of Structural Biology, Department of Molecular and Cell Biology, University of Leicester, Leicester, United KingdomHenry Wellcome Laboratories of Structural Biology, Department of Molecular and Cell Biology, University of Leicester, Leicester, United KingdomHenry Wellcome Laboratories of Structural Biology, Department of Molecular and Cell Biology, University of Leicester, Leicester, United KingdomSchool of Life Sciences, University of Warwick, Coventry, United KingdomHenry Wellcome Laboratories of Structural Biology, Department of Molecular and Cell Biology, University of Leicester, Leicester, United KingdomProtein and Nucleic Acid Chemistry Laboratory, Core Biotechnology Services, University of Leicester, Leicester, United KingdomHenry Wellcome Laboratories of Structural Biology, Department of Molecular and Cell Biology, University of Leicester, Leicester, United KingdomSchool of Life Sciences, University of Warwick, Coventry, United KingdomHenry Wellcome Laboratories of Structural Biology, Department of Molecular and Cell Biology, University of Leicester, Leicester, United KingdomThe NuRD complex is a multi-protein transcriptional corepressor that couples histone deacetylase and ATP-dependent chromatin remodelling activities. The complex regulates the higher-order structure of chromatin, and has important roles in the regulation of gene expression, DNA damage repair and cell differentiation. HDACs 1 and 2 are recruited by the MTA1 corepressor to form the catalytic core of the complex. The histone chaperone protein RBBP4, has previously been shown to bind to the carboxy-terminal tail of MTA1. We show that MTA1 recruits a second copy of RBBP4. The crystal structure reveals an extensive interface between MTA1 and RBBP4. An EM structure, supported by SAXS and crosslinking, reveals the architecture of the dimeric HDAC1:MTA1:RBBP4 assembly which forms the core of the NuRD complex. We find evidence that in this complex RBBP4 mediates interaction with histone H3 tails, but not histone H4, suggesting a mechanism for recruitment of the NuRD complex to chromatin.https://elifesciences.org/articles/13941transcription regulationhistone deacetylaserepression complexchromatin
spellingShingle Christopher J Millard
Niranjan Varma
Almutasem Saleh
Kyle Morris
Peter J Watson
Andrew R Bottrill
Louise Fairall
Corinne J Smith
John WR Schwabe
The structure of the core NuRD repression complex provides insights into its interaction with chromatin
eLife
transcription regulation
histone deacetylase
repression complex
chromatin
title The structure of the core NuRD repression complex provides insights into its interaction with chromatin
title_full The structure of the core NuRD repression complex provides insights into its interaction with chromatin
title_fullStr The structure of the core NuRD repression complex provides insights into its interaction with chromatin
title_full_unstemmed The structure of the core NuRD repression complex provides insights into its interaction with chromatin
title_short The structure of the core NuRD repression complex provides insights into its interaction with chromatin
title_sort structure of the core nurd repression complex provides insights into its interaction with chromatin
topic transcription regulation
histone deacetylase
repression complex
chromatin
url https://elifesciences.org/articles/13941
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