Practical guidelines for Bayesian phylogenetic inference using Markov Chain Monte Carlo (MCMC) [version 1; peer review: 2 approved, 1 approved with reservations]

Practical guidelines for Bayesian phylogenetic inference using Markov Chain Monte Carlo (MCMC) [version 1; peer review: 2 approved, 1 approved with reservations]

Phylogenetic estimation is, and has always been, a complex endeavor. Estimating a phylogenetic tree involves evaluating many possible solutions and possible evolutionary histories that could explain a set of observed data, typically by using a model of evolution. Modern statistical methods involve n...

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Bibliographic Details
Main Authors: Orlando Schwery, Joëlle Barido-Sottani, Chi Zhang, Rachel C. M. Warnock, April Marie Wright
Format: Article
Language:English
Published: F1000 Research Ltd 2023-11-01
Series:Open Research Europe
Subjects:
Bayesian phylogenetic inference
MCMC
troubleshooting
phylogenetic inference software
fossilized birth-death
total-evidence
eng
Online Access:https://open-research-europe.ec.europa.eu/articles/3-204/v1

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