Bacterial accumulation in intestinal folds induced by physical and biological factors

Abstract Background The gut microbiota, vital for host health, influences metabolism, immune function, and development. Understanding the dynamic processes of bacterial accumulation within the gut is crucial, as it is closely related to immune responses, antibiotic resistance, and colorectal cancer....

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Main Authors: Jinyou Yang, Toma Isaka, Kenji Kikuchi, Keiko Numayama-Tsuruta, Takuji Ishikawa
Format: Article
Language:English
Published: BMC 2024-04-01
Series:BMC Biology
Subjects:
Online Access:https://doi.org/10.1186/s12915-024-01874-5
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author Jinyou Yang
Toma Isaka
Kenji Kikuchi
Keiko Numayama-Tsuruta
Takuji Ishikawa
author_facet Jinyou Yang
Toma Isaka
Kenji Kikuchi
Keiko Numayama-Tsuruta
Takuji Ishikawa
author_sort Jinyou Yang
collection DOAJ
description Abstract Background The gut microbiota, vital for host health, influences metabolism, immune function, and development. Understanding the dynamic processes of bacterial accumulation within the gut is crucial, as it is closely related to immune responses, antibiotic resistance, and colorectal cancer. We investigated Escherichia coli behavior and distribution in zebrafish larval intestines, focusing on the gut microenvironment. Results We discovered that E. coli spread was considerably suppressed within the intestinal folds, leading to a strong physical accumulation in the folds. Moreover, a higher concentration of E. coli on the dorsal side than on the ventral side was observed. Our in vitro microfluidic experiments and theoretical analysis revealed that the overall distribution of E. coli in the intestines was established by a combination of physical factor and bacterial taxis. Conclusions Our findings provide valuable insight into how the intestinal microenvironment affects bacterial motility and accumulation, enhancing our understanding of the behavioral and ecological dynamics of the intestinal microbiota.
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spelling doaj.art-4f7351122d6d47c09c2f11415770b5232024-04-07T11:30:55ZengBMCBMC Biology1741-70072024-04-0122111210.1186/s12915-024-01874-5Bacterial accumulation in intestinal folds induced by physical and biological factorsJinyou Yang0Toma Isaka1Kenji Kikuchi2Keiko Numayama-Tsuruta3Takuji Ishikawa4School of Intelligent Medicine, China Medical UniversityDepartment of Biomedical Engineering, Graduate School of Biomedical Engineering, Tohoku UniversityDepartment of Biomedical Engineering, Graduate School of Biomedical Engineering, Tohoku UniversityDepartment of Biomedical Engineering, Graduate School of Biomedical Engineering, Tohoku UniversityDepartment of Biomedical Engineering, Graduate School of Biomedical Engineering, Tohoku UniversityAbstract Background The gut microbiota, vital for host health, influences metabolism, immune function, and development. Understanding the dynamic processes of bacterial accumulation within the gut is crucial, as it is closely related to immune responses, antibiotic resistance, and colorectal cancer. We investigated Escherichia coli behavior and distribution in zebrafish larval intestines, focusing on the gut microenvironment. Results We discovered that E. coli spread was considerably suppressed within the intestinal folds, leading to a strong physical accumulation in the folds. Moreover, a higher concentration of E. coli on the dorsal side than on the ventral side was observed. Our in vitro microfluidic experiments and theoretical analysis revealed that the overall distribution of E. coli in the intestines was established by a combination of physical factor and bacterial taxis. Conclusions Our findings provide valuable insight into how the intestinal microenvironment affects bacterial motility and accumulation, enhancing our understanding of the behavioral and ecological dynamics of the intestinal microbiota.https://doi.org/10.1186/s12915-024-01874-5Gut microbiotaBacterial accumulationZebrafish intestineEscherichia coliMathematical analysis
spellingShingle Jinyou Yang
Toma Isaka
Kenji Kikuchi
Keiko Numayama-Tsuruta
Takuji Ishikawa
Bacterial accumulation in intestinal folds induced by physical and biological factors
BMC Biology
Gut microbiota
Bacterial accumulation
Zebrafish intestine
Escherichia coli
Mathematical analysis
title Bacterial accumulation in intestinal folds induced by physical and biological factors
title_full Bacterial accumulation in intestinal folds induced by physical and biological factors
title_fullStr Bacterial accumulation in intestinal folds induced by physical and biological factors
title_full_unstemmed Bacterial accumulation in intestinal folds induced by physical and biological factors
title_short Bacterial accumulation in intestinal folds induced by physical and biological factors
title_sort bacterial accumulation in intestinal folds induced by physical and biological factors
topic Gut microbiota
Bacterial accumulation
Zebrafish intestine
Escherichia coli
Mathematical analysis
url https://doi.org/10.1186/s12915-024-01874-5
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AT keikonumayamatsuruta bacterialaccumulationinintestinalfoldsinducedbyphysicalandbiologicalfactors
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