Entropy Transfer between Residue Pairs and Allostery in Proteins: Quantifying Allosteric Communication in Ubiquitin.
It has recently been proposed by Gunasakaran et al. that allostery may be an intrinsic property of all proteins. Here, we develop a computational method that can determine and quantify allosteric activity in any given protein. Based on Schreiber's transfer entropy formulation, our approach lead...
Main Authors: | Aysima Hacisuleyman, Burak Erman |
---|---|
Format: | Article |
Language: | English |
Published: |
Public Library of Science (PLoS)
2017-01-01
|
Series: | PLoS Computational Biology |
Online Access: | http://europepmc.org/articles/PMC5283753?pdf=render |
Similar Items
-
From Deep Mutational Mapping of Allosteric Protein Landscapes to Deep Learning of Allostery and Hidden Allosteric Sites: Zooming in on “Allosteric Intersection” of Biochemical and Big Data Approaches
by: Gennady Verkhivker, et al.
Published: (2023-04-01) -
Deconstructing allostery by computational assessment of the binding determinants of allosteric PTP1B modulators
by: Adele Hardie, et al.
Published: (2023-06-01) -
Rigid Residue Scan Simulations Systematically Reveal Residue Entropic Roles in Protein Allostery.
by: Robert Kalescky, et al.
Published: (2016-04-01) -
AIM for Allostery: Using the Ising Model to Understand Information Processing and Transmission in Allosteric Biomolecular Systems
by: Michael V. LeVine, et al.
Published: (2015-05-01) -
Decoding the mechanisms of allostery
by: Saif Khan, et al.
Published: (2023-06-01)