“Omics”-Informed Drug and Biomarker Discovery: Opportunities, Challenges and Future Perspectives

The pharmaceutical industry faces unsustainable program failure despite significant increases in investment. Dwindling discovery pipelines, rapidly expanding R&D budgets and increasing regulatory control, predict significant gaps in the future drug markets. The cumulative duration of discove...

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Main Authors: Holly Matthews, James Hanison, Niroshini Nirmalan
Format: Article
Language:English
Published: MDPI AG 2016-09-01
Series:Proteomes
Subjects:
Online Access:http://www.mdpi.com/2227-7382/4/3/28
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author Holly Matthews
James Hanison
Niroshini Nirmalan
author_facet Holly Matthews
James Hanison
Niroshini Nirmalan
author_sort Holly Matthews
collection DOAJ
description The pharmaceutical industry faces unsustainable program failure despite significant increases in investment. Dwindling discovery pipelines, rapidly expanding R&D budgets and increasing regulatory control, predict significant gaps in the future drug markets. The cumulative duration of discovery from concept to commercialisation is unacceptably lengthy, and adds to the deepening crisis. Existing animal models predicting clinical translations are simplistic, highly reductionist and, therefore, not fit for purpose. The catastrophic consequences of ever-increasing attrition rates are most likely to be felt in the developing world, where resistance acquisition by killer diseases like malaria, tuberculosis and HIV have paced far ahead of new drug discovery. The coming of age of Omics-based applications makes available a formidable technological resource to further expand our knowledge of the complexities of human disease. The standardisation, analysis and comprehensive collation of the “data-heavy” outputs of these sciences are indeed challenging. A renewed focus on increasing reproducibility by understanding inherent biological, methodological, technical and analytical variables is crucial if reliable and useful inferences with potential for translation are to be achieved. The individual Omics sciences—genomics, transcriptomics, proteomics and metabolomics—have the singular advantage of being complimentary for cross validation, and together could potentially enable a much-needed systems biology perspective of the perturbations underlying disease processes. If current adverse trends are to be reversed, it is imperative that a shift in the R&D focus from speed to quality is achieved. In this review, we discuss the potential implications of recent Omics-based advances for the drug development process.
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spelling doaj.art-4fabaf2091d0453faf2f631095fdc1ff2022-12-22T01:58:34ZengMDPI AGProteomes2227-73822016-09-01432810.3390/proteomes4030028proteomes4030028“Omics”-Informed Drug and Biomarker Discovery: Opportunities, Challenges and Future PerspectivesHolly Matthews0James Hanison1Niroshini Nirmalan2Department of Life Sciences, Faculty of Natural Sciences, Imperial College, London SW7 2AZ, UKManchester Royal Infirmary, Oxford Road, Greater Manchester M13 9WL, UKEnvironment and Life Sciences, University of Salford, Greater Manchester M5 4WT, UKThe pharmaceutical industry faces unsustainable program failure despite significant increases in investment. Dwindling discovery pipelines, rapidly expanding R&D budgets and increasing regulatory control, predict significant gaps in the future drug markets. The cumulative duration of discovery from concept to commercialisation is unacceptably lengthy, and adds to the deepening crisis. Existing animal models predicting clinical translations are simplistic, highly reductionist and, therefore, not fit for purpose. The catastrophic consequences of ever-increasing attrition rates are most likely to be felt in the developing world, where resistance acquisition by killer diseases like malaria, tuberculosis and HIV have paced far ahead of new drug discovery. The coming of age of Omics-based applications makes available a formidable technological resource to further expand our knowledge of the complexities of human disease. The standardisation, analysis and comprehensive collation of the “data-heavy” outputs of these sciences are indeed challenging. A renewed focus on increasing reproducibility by understanding inherent biological, methodological, technical and analytical variables is crucial if reliable and useful inferences with potential for translation are to be achieved. The individual Omics sciences—genomics, transcriptomics, proteomics and metabolomics—have the singular advantage of being complimentary for cross validation, and together could potentially enable a much-needed systems biology perspective of the perturbations underlying disease processes. If current adverse trends are to be reversed, it is imperative that a shift in the R&D focus from speed to quality is achieved. In this review, we discuss the potential implications of recent Omics-based advances for the drug development process.http://www.mdpi.com/2227-7382/4/3/28drug discoveryomicsgenomicsproteomicsmetabolomics
spellingShingle Holly Matthews
James Hanison
Niroshini Nirmalan
“Omics”-Informed Drug and Biomarker Discovery: Opportunities, Challenges and Future Perspectives
Proteomes
drug discovery
omics
genomics
proteomics
metabolomics
title “Omics”-Informed Drug and Biomarker Discovery: Opportunities, Challenges and Future Perspectives
title_full “Omics”-Informed Drug and Biomarker Discovery: Opportunities, Challenges and Future Perspectives
title_fullStr “Omics”-Informed Drug and Biomarker Discovery: Opportunities, Challenges and Future Perspectives
title_full_unstemmed “Omics”-Informed Drug and Biomarker Discovery: Opportunities, Challenges and Future Perspectives
title_short “Omics”-Informed Drug and Biomarker Discovery: Opportunities, Challenges and Future Perspectives
title_sort omics informed drug and biomarker discovery opportunities challenges and future perspectives
topic drug discovery
omics
genomics
proteomics
metabolomics
url http://www.mdpi.com/2227-7382/4/3/28
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AT jameshanison omicsinformeddrugandbiomarkerdiscoveryopportunitieschallengesandfutureperspectives
AT niroshininirmalan omicsinformeddrugandbiomarkerdiscoveryopportunitieschallengesandfutureperspectives