Characterization of the chloroplast genome of the marine microalga Tetraselmis marina (Cienkowski) R.E.Norris, Hori & Chihara 1980
AbstractTetraselmis marina (Cienkowski) R.E.Norris, Hori & Chihara 1980, a costal green microalga, is considered as a promising animal feed in aquaculture due to the high content of fatty acids and carotenoid. Furthermore, T. marina plays important roles in bioremediation. In this study, we asse...
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| Format: | Article |
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Taylor & Francis Group
2023-12-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | https://www.tandfonline.com/doi/10.1080/23802359.2023.2288892 |
| _version_ | 1797244412990849024 |
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| author | Fangfang Yang Yi Huang Lijuan Long |
| author_facet | Fangfang Yang Yi Huang Lijuan Long |
| author_sort | Fangfang Yang |
| collection | DOAJ |
| description | AbstractTetraselmis marina (Cienkowski) R.E.Norris, Hori & Chihara 1980, a costal green microalga, is considered as a promising animal feed in aquaculture due to the high content of fatty acids and carotenoid. Furthermore, T. marina plays important roles in bioremediation. In this study, we assembled the complete chloroplast genome of T. marina. Results showed that the full length of the complete chloroplast genome was 96,151 bp, containing a large single-copy region of 62,574 bp, a small single-copy region of 1261 bp, and a pair of inverted repeat regions of 16,158 bp. The GC content of the genome was 36.6%. A total of 125 genes were annotated, including 81 protein coding genes, 38 tRNA genes, and six rRNA genes. Phylogenetic analysis based on 22 chloroplast genomes suggested that T. marina was closely related to Tetraselmis sp. CCMP 881. |
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| format | Article |
| id | doaj.art-50ecb0fff15c485da1373b206f3abf0f |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-04-24T19:10:36Z |
| publishDate | 2023-12-01 |
| publisher | Taylor & Francis Group |
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| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-50ecb0fff15c485da1373b206f3abf0f2024-03-26T11:28:12ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592023-12-018121347135010.1080/23802359.2023.2288892Characterization of the chloroplast genome of the marine microalga Tetraselmis marina (Cienkowski) R.E.Norris, Hori & Chihara 1980Fangfang Yang0Yi Huang1Lijuan Long2Key Laboratory of Tropical Marine Bio-resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, ChinaKey Laboratory of Tropical Marine Bio-resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, ChinaKey Laboratory of Tropical Marine Bio-resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, ChinaAbstractTetraselmis marina (Cienkowski) R.E.Norris, Hori & Chihara 1980, a costal green microalga, is considered as a promising animal feed in aquaculture due to the high content of fatty acids and carotenoid. Furthermore, T. marina plays important roles in bioremediation. In this study, we assembled the complete chloroplast genome of T. marina. Results showed that the full length of the complete chloroplast genome was 96,151 bp, containing a large single-copy region of 62,574 bp, a small single-copy region of 1261 bp, and a pair of inverted repeat regions of 16,158 bp. The GC content of the genome was 36.6%. A total of 125 genes were annotated, including 81 protein coding genes, 38 tRNA genes, and six rRNA genes. Phylogenetic analysis based on 22 chloroplast genomes suggested that T. marina was closely related to Tetraselmis sp. CCMP 881.https://www.tandfonline.com/doi/10.1080/23802359.2023.2288892Chloroplast genomemarine microalgaTetraselmis marina |
| spellingShingle | Fangfang Yang Yi Huang Lijuan Long Characterization of the chloroplast genome of the marine microalga Tetraselmis marina (Cienkowski) R.E.Norris, Hori & Chihara 1980 Mitochondrial DNA. Part B. Resources Chloroplast genome marine microalga Tetraselmis marina |
| title | Characterization of the chloroplast genome of the marine microalga Tetraselmis marina (Cienkowski) R.E.Norris, Hori & Chihara 1980 |
| title_full | Characterization of the chloroplast genome of the marine microalga Tetraselmis marina (Cienkowski) R.E.Norris, Hori & Chihara 1980 |
| title_fullStr | Characterization of the chloroplast genome of the marine microalga Tetraselmis marina (Cienkowski) R.E.Norris, Hori & Chihara 1980 |
| title_full_unstemmed | Characterization of the chloroplast genome of the marine microalga Tetraselmis marina (Cienkowski) R.E.Norris, Hori & Chihara 1980 |
| title_short | Characterization of the chloroplast genome of the marine microalga Tetraselmis marina (Cienkowski) R.E.Norris, Hori & Chihara 1980 |
| title_sort | characterization of the chloroplast genome of the marine microalga tetraselmis marina cienkowski r e norris hori chihara 1980 |
| topic | Chloroplast genome marine microalga Tetraselmis marina |
| url | https://www.tandfonline.com/doi/10.1080/23802359.2023.2288892 |
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