GATA: a graphic alignment tool for comparative sequence analysis
<p>Abstract</p> <p>Background</p> <p>Several problems exist with current methods used to align DNA sequences for comparative sequence analysis. Most dynamic programming algorithms assume that conserved sequence elements are collinear. This assumption appears valid when...
Main Authors: | Nix David A, Eisen Michael B |
---|---|
Format: | Article |
Language: | English |
Published: |
BMC
2005-01-01
|
Series: | BMC Bioinformatics |
Online Access: | http://www.biomedcentral.com/1471-2105/6/9 |
Similar Items
-
Comparative analysis of alignment tools for application on Nanopore sequencing data
by: Becht Chiara, et al.
Published: (2021-10-01) -
High-throughput sequence alignment using Graphics Processing Units
by: Trapnell Cole, et al.
Published: (2007-12-01) -
Benchmarking tools for the alignment of functional noncoding DNA
by: Stoye Jens, et al.
Published: (2004-01-01) -
Embedded-Based Graphics Processing Unit Cluster Platform for Multiple Sequence Alignments
by: Jyh-Da Wei, et al.
Published: (2017-08-01) -
QuickProbs--a fast multiple sequence alignment algorithm designed for graphics processors.
by: Adam Gudyś, et al.
Published: (2014-01-01)