First DNA barcoding-based record of Lysiosquilla maculata (Crustacea: Stomatopoda) from Chennai coast, Tamil Nadu, India
The taxonomic identification of mantis shrimp Lysiosquilla maculata was performed through DNA barcoding analysis of specimens collected from the Kasimedu fishing port, Chennai coast, Tamil Nadu, India. The mitochondrial cytochrome oxidase subunit I (mtCOI) gene with a region of 650 bp was sequenced...
| Main Authors: | , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Instituto Nacional de Investigación y Desarrollo Pesquero (INIDEP)
2023-12-01
|
| Series: | Marine and Fishery Sciences |
| Subjects: | |
| Online Access: | https://ojs.inidep.edu.ar/index.php/mafis/article/view/317 |
| _version_ | 1797403834486620160 |
|---|---|
| author | Chelliah Babu Krishnan Silambarasan Antony P. Anrose Antony P. Tiburtius |
| author_facet | Chelliah Babu Krishnan Silambarasan Antony P. Anrose Antony P. Tiburtius |
| author_sort | Chelliah Babu |
| collection | DOAJ |
| description |
The taxonomic identification of mantis shrimp Lysiosquilla maculata was performed through DNA barcoding analysis of specimens collected from the Kasimedu fishing port, Chennai coast, Tamil Nadu, India. The mitochondrial cytochrome oxidase subunit I (mtCOI) gene with a region of 650 bp was sequenced for phylogenetic analysis. In the present record, mitochondrial gene sequences were used to identify the mantis shrimp. This is the first confirmed DNA barcoding record from Indian waters, whose mtCOI sequence was deposited in GenBank. The Neighbor-joining method was used for phylogenetic analysis. The calculated pairwise genetic distance with five closely related species ranged from 0.01 to 0.094%. The morphological and molecular analysis confirm that the specimens collected correspond to L. maculata.
|
| first_indexed | 2024-03-09T02:45:07Z |
| format | Article |
| id | doaj.art-51c70d31998e40efa89ed41791307beb |
| institution | Directory Open Access Journal |
| issn | 2683-7951 |
| language | English |
| last_indexed | 2024-03-09T02:45:07Z |
| publishDate | 2023-12-01 |
| publisher | Instituto Nacional de Investigación y Desarrollo Pesquero (INIDEP) |
| record_format | Article |
| series | Marine and Fishery Sciences |
| spelling | doaj.art-51c70d31998e40efa89ed41791307beb2023-12-05T18:15:49ZengInstituto Nacional de Investigación y Desarrollo Pesquero (INIDEP)Marine and Fishery Sciences2683-79512023-12-0137210.47193/mafis.3722024010503First DNA barcoding-based record of Lysiosquilla maculata (Crustacea: Stomatopoda) from Chennai coast, Tamil Nadu, IndiaChelliah Babu0Krishnan Silambarasan1Antony P. Anrose 2Antony P. Tiburtius3Fishery Survey of India, Royapuram, Chennai, Tamil Nadu, IndiaFishery Survey of India, Royapuram, Chennai, Tamil Nadu, IndiaFishery Survey of India, Royapuram, Chennai, Tamil Nadu, IndiaFishery Survey of India, Royapuram, Chennai, Tamil Nadu, India The taxonomic identification of mantis shrimp Lysiosquilla maculata was performed through DNA barcoding analysis of specimens collected from the Kasimedu fishing port, Chennai coast, Tamil Nadu, India. The mitochondrial cytochrome oxidase subunit I (mtCOI) gene with a region of 650 bp was sequenced for phylogenetic analysis. In the present record, mitochondrial gene sequences were used to identify the mantis shrimp. This is the first confirmed DNA barcoding record from Indian waters, whose mtCOI sequence was deposited in GenBank. The Neighbor-joining method was used for phylogenetic analysis. The calculated pairwise genetic distance with five closely related species ranged from 0.01 to 0.094%. The morphological and molecular analysis confirm that the specimens collected correspond to L. maculata. https://ojs.inidep.edu.ar/index.php/mafis/article/view/317Biodiversitymantis shrimpmitochondrial DNAphylogenygenetic distance |
| spellingShingle | Chelliah Babu Krishnan Silambarasan Antony P. Anrose Antony P. Tiburtius First DNA barcoding-based record of Lysiosquilla maculata (Crustacea: Stomatopoda) from Chennai coast, Tamil Nadu, India Marine and Fishery Sciences Biodiversity mantis shrimp mitochondrial DNA phylogeny genetic distance |
| title | First DNA barcoding-based record of Lysiosquilla maculata (Crustacea: Stomatopoda) from Chennai coast, Tamil Nadu, India |
| title_full | First DNA barcoding-based record of Lysiosquilla maculata (Crustacea: Stomatopoda) from Chennai coast, Tamil Nadu, India |
| title_fullStr | First DNA barcoding-based record of Lysiosquilla maculata (Crustacea: Stomatopoda) from Chennai coast, Tamil Nadu, India |
| title_full_unstemmed | First DNA barcoding-based record of Lysiosquilla maculata (Crustacea: Stomatopoda) from Chennai coast, Tamil Nadu, India |
| title_short | First DNA barcoding-based record of Lysiosquilla maculata (Crustacea: Stomatopoda) from Chennai coast, Tamil Nadu, India |
| title_sort | first dna barcoding based record of lysiosquilla maculata crustacea stomatopoda from chennai coast tamil nadu india |
| topic | Biodiversity mantis shrimp mitochondrial DNA phylogeny genetic distance |
| url | https://ojs.inidep.edu.ar/index.php/mafis/article/view/317 |
| work_keys_str_mv | AT chelliahbabu firstdnabarcodingbasedrecordoflysiosquillamaculatacrustaceastomatopodafromchennaicoasttamilnaduindia AT krishnansilambarasan firstdnabarcodingbasedrecordoflysiosquillamaculatacrustaceastomatopodafromchennaicoasttamilnaduindia AT antonypanrose firstdnabarcodingbasedrecordoflysiosquillamaculatacrustaceastomatopodafromchennaicoasttamilnaduindia AT antonyptiburtius firstdnabarcodingbasedrecordoflysiosquillamaculatacrustaceastomatopodafromchennaicoasttamilnaduindia |