Long non-coding RNA lnc_3712 impedes nuclear reprogramming via repressing Kdm5b

Long non-coding RNAs (lncRNAs) are involved in shaping chromosome conformation and regulation of preimplantation development. However, the role of lncRNA during somatic cell nuclear transfer (SCNT) reprogramming remains largely unknown. In the present study, we identified 114 upregulated lncRNAs in...

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Main Authors: Mingtian Deng, Yongjie Wan, Baobao Chen, Xiangpeng Dai, Zifei Liu, Yingnan Yang, Yu Cai, Yanli Zhang, Feng Wang
Format: Article
Language:English
Published: Elsevier 2021-06-01
Series:Molecular Therapy: Nucleic Acids
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2162253121000512
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author Mingtian Deng
Yongjie Wan
Baobao Chen
Xiangpeng Dai
Zifei Liu
Yingnan Yang
Yu Cai
Yanli Zhang
Feng Wang
author_facet Mingtian Deng
Yongjie Wan
Baobao Chen
Xiangpeng Dai
Zifei Liu
Yingnan Yang
Yu Cai
Yanli Zhang
Feng Wang
author_sort Mingtian Deng
collection DOAJ
description Long non-coding RNAs (lncRNAs) are involved in shaping chromosome conformation and regulation of preimplantation development. However, the role of lncRNA during somatic cell nuclear transfer (SCNT) reprogramming remains largely unknown. In the present study, we identified 114 upregulated lncRNAs in the 8-cell SCNT embryos as candidate key molecules involved in nuclear reprogramming in goat. We found that H3K4me3 was an epigenetic barrier in goat nuclear reprogramming that and injection of Kdm5b mRNA greatly improved SCNT embryos development through removal of H3K4me3. We further reported that knockdown of lnc_3712 increased the expression of Kdm5b, which led to H3K4me3 demethylation. Of note, the development of goat SCNT embryos was improved when lnc_3712 was knocked down, whereas the blastocyst rate showed no difference in lnc_3712 and Kdm5b double knockdown SCNT embryos compared with the negative control SCNT embryos. Specifically, in lnc_3712 knockdown SCNT embryos, partial of the transcriptional activity and the expression of critical embryonic genes (Wee1, Ctsb, and Ybx1) were similar with that of in vitro fertilization embryos. Therefore, our results elucidate the critical role of lnc_3712 in regulating the development of goat SCNT embryos via repressing Kdm5b, which advances our current understanding of the role of lncRNAs during nuclear reprogramming.
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spelling doaj.art-5239734ae03f4653841fe28db7ebe45a2022-12-21T20:25:19ZengElsevierMolecular Therapy: Nucleic Acids2162-25312021-06-01245466Long non-coding RNA lnc_3712 impedes nuclear reprogramming via repressing Kdm5bMingtian Deng0Yongjie Wan1Baobao Chen2Xiangpeng Dai3Zifei Liu4Yingnan Yang5Yu Cai6Yanli Zhang7Feng Wang8Jiangsu Livestock Embryo Engineering Laboratory, College of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, ChinaJiangsu Livestock Embryo Engineering Laboratory, College of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, ChinaCollege of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, ChinaKey Laboratory of Organ Regeneration and Transplantation of Ministry of Education, First Hospital, Jilin University, Changchun, Jilin 130021, ChinaJiangsu Livestock Embryo Engineering Laboratory, College of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, ChinaJiangsu Livestock Embryo Engineering Laboratory, College of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, ChinaJiangsu Livestock Embryo Engineering Laboratory, College of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, ChinaJiangsu Livestock Embryo Engineering Laboratory, College of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, China; Corresponding author: Yanli Zhang, PhD, Jiangsu Livestock Embryo Engineering Laboratory, College of Animal Science and Technology, Nanjing Agricultural University, Nanjing, 210095, China.Jiangsu Livestock Embryo Engineering Laboratory, College of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, China; Corresponding author: Feng Wang, PhD, Jiangsu Livestock Embryo Engineering Laboratory, College of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, China.Long non-coding RNAs (lncRNAs) are involved in shaping chromosome conformation and regulation of preimplantation development. However, the role of lncRNA during somatic cell nuclear transfer (SCNT) reprogramming remains largely unknown. In the present study, we identified 114 upregulated lncRNAs in the 8-cell SCNT embryos as candidate key molecules involved in nuclear reprogramming in goat. We found that H3K4me3 was an epigenetic barrier in goat nuclear reprogramming that and injection of Kdm5b mRNA greatly improved SCNT embryos development through removal of H3K4me3. We further reported that knockdown of lnc_3712 increased the expression of Kdm5b, which led to H3K4me3 demethylation. Of note, the development of goat SCNT embryos was improved when lnc_3712 was knocked down, whereas the blastocyst rate showed no difference in lnc_3712 and Kdm5b double knockdown SCNT embryos compared with the negative control SCNT embryos. Specifically, in lnc_3712 knockdown SCNT embryos, partial of the transcriptional activity and the expression of critical embryonic genes (Wee1, Ctsb, and Ybx1) were similar with that of in vitro fertilization embryos. Therefore, our results elucidate the critical role of lnc_3712 in regulating the development of goat SCNT embryos via repressing Kdm5b, which advances our current understanding of the role of lncRNAs during nuclear reprogramming.http://www.sciencedirect.com/science/article/pii/S2162253121000512somatic cell nuclear transferreprogramminglong non-coding RNAKdm5bH3K4me3goat
spellingShingle Mingtian Deng
Yongjie Wan
Baobao Chen
Xiangpeng Dai
Zifei Liu
Yingnan Yang
Yu Cai
Yanli Zhang
Feng Wang
Long non-coding RNA lnc_3712 impedes nuclear reprogramming via repressing Kdm5b
Molecular Therapy: Nucleic Acids
somatic cell nuclear transfer
reprogramming
long non-coding RNA
Kdm5b
H3K4me3
goat
title Long non-coding RNA lnc_3712 impedes nuclear reprogramming via repressing Kdm5b
title_full Long non-coding RNA lnc_3712 impedes nuclear reprogramming via repressing Kdm5b
title_fullStr Long non-coding RNA lnc_3712 impedes nuclear reprogramming via repressing Kdm5b
title_full_unstemmed Long non-coding RNA lnc_3712 impedes nuclear reprogramming via repressing Kdm5b
title_short Long non-coding RNA lnc_3712 impedes nuclear reprogramming via repressing Kdm5b
title_sort long non coding rna lnc 3712 impedes nuclear reprogramming via repressing kdm5b
topic somatic cell nuclear transfer
reprogramming
long non-coding RNA
Kdm5b
H3K4me3
goat
url http://www.sciencedirect.com/science/article/pii/S2162253121000512
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