The complete chloroplast genome of Piper sarmentosum Roxburgh, 1820 (Piperaceae)
Piper sarmentosum Roxb. (Piperaceae) is a traditional medicinal herb native to Southeast Asia. The complete genome of P. sarmentosum was sequenced and characterized in this study with the aim of providing genomic resources for the evolution and molecular breeding of P. sarmentosum. It has a typical...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2022-05-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2022.2074805 |
| _version_ | 1827772234341548032 |
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| author | Xiaoshan Geng Yulin Zhu Zhenxin Ren Rong Chen Qin Liu |
| author_facet | Xiaoshan Geng Yulin Zhu Zhenxin Ren Rong Chen Qin Liu |
| author_sort | Xiaoshan Geng |
| collection | DOAJ |
| description | Piper sarmentosum Roxb. (Piperaceae) is a traditional medicinal herb native to Southeast Asia. The complete genome of P. sarmentosum was sequenced and characterized in this study with the aim of providing genomic resources for the evolution and molecular breeding of P. sarmentosum. It has a typical quadripartite structure, with a large single-copy (LSC) region of 88,979 bp, a small single-copy (SSC) region of 18,274 bp, and two copies of 27,068 bp inverted-repeat regions (IRa and IRb). A total of 130 genes were annotated, comprising 85 protein-coding genes (PCGs), 8 ribosomal RNA (rRNA) genes, and 37 transfer RNA (tRNA) genes. The phylogenetic tree showed that P. sarmentosum in the current study is closely related to Piper longum. |
| first_indexed | 2024-03-11T13:05:27Z |
| format | Article |
| id | doaj.art-532f866cb23646188e2c24c065f1038b |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:05:27Z |
| publishDate | 2022-05-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-532f866cb23646188e2c24c065f1038b2023-11-03T14:36:03ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592022-05-017585485510.1080/23802359.2022.20748052074805The complete chloroplast genome of Piper sarmentosum Roxburgh, 1820 (Piperaceae)Xiaoshan Geng0Yulin Zhu1Zhenxin Ren2Rong Chen3Qin Liu4Guangxi Key Laboratory of Agricultural Resources Chemistry and Biotechnology, Yulin Normal UniversityGuangxi Key Laboratory of Agricultural Resources Chemistry and Biotechnology, Yulin Normal UniversityGuangxi Key Laboratory of Agricultural Resources Chemistry and Biotechnology, Yulin Normal UniversityGuangxi Key Laboratory of Agricultural Resources Chemistry and Biotechnology, Yulin Normal UniversityGuangxi Key Laboratory of Agricultural Resources Chemistry and Biotechnology, Yulin Normal UniversityPiper sarmentosum Roxb. (Piperaceae) is a traditional medicinal herb native to Southeast Asia. The complete genome of P. sarmentosum was sequenced and characterized in this study with the aim of providing genomic resources for the evolution and molecular breeding of P. sarmentosum. It has a typical quadripartite structure, with a large single-copy (LSC) region of 88,979 bp, a small single-copy (SSC) region of 18,274 bp, and two copies of 27,068 bp inverted-repeat regions (IRa and IRb). A total of 130 genes were annotated, comprising 85 protein-coding genes (PCGs), 8 ribosomal RNA (rRNA) genes, and 37 transfer RNA (tRNA) genes. The phylogenetic tree showed that P. sarmentosum in the current study is closely related to Piper longum.http://dx.doi.org/10.1080/23802359.2022.2074805chloroplast genomephylogenetic analysispiper sarmentosum |
| spellingShingle | Xiaoshan Geng Yulin Zhu Zhenxin Ren Rong Chen Qin Liu The complete chloroplast genome of Piper sarmentosum Roxburgh, 1820 (Piperaceae) Mitochondrial DNA. Part B. Resources chloroplast genome phylogenetic analysis piper sarmentosum |
| title | The complete chloroplast genome of Piper sarmentosum Roxburgh, 1820 (Piperaceae) |
| title_full | The complete chloroplast genome of Piper sarmentosum Roxburgh, 1820 (Piperaceae) |
| title_fullStr | The complete chloroplast genome of Piper sarmentosum Roxburgh, 1820 (Piperaceae) |
| title_full_unstemmed | The complete chloroplast genome of Piper sarmentosum Roxburgh, 1820 (Piperaceae) |
| title_short | The complete chloroplast genome of Piper sarmentosum Roxburgh, 1820 (Piperaceae) |
| title_sort | complete chloroplast genome of piper sarmentosum roxburgh 1820 piperaceae |
| topic | chloroplast genome phylogenetic analysis piper sarmentosum |
| url | http://dx.doi.org/10.1080/23802359.2022.2074805 |
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